RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZNF550Q7Z398 422 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 LACC1Q8IV20 430 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 UBQLNLQ8IYU4 475 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 TNIP2Q8NFZ5 429 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 RND1Q92730 232 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 DTNBP1Q96EV8 351 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 TIMP4Q99727 224 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 PIGQQ9BRB3 760 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 TTYH2Q9BSA4 534 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 EXOSC3Q9NQT5 275 aaKnown RBP8.16□□□□□ -1.1
VCP-206ENST00000480327 CTPS2Q9NRF8 586 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 KLHL28Q9NXS3 571 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 Q9UFV3 132 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 KCNN3Q9UGI6 736 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 CAMK2AQ9UQM7 478 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 SH3GLB1Q9Y371 365 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 MRPS18CQ9Y3D5 142 aaKnown RBP8.16□□□□□ -1.1
VCP-206ENST00000480327 V9GYQ6 96 aa8.16□□□□□ -1.1
VCP-206ENST00000480327 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 H0YC42 278 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 EBAG9O00559 213 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 ARPC2O15144 300 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 SEC14L5O43304 696 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 EFNA2O43921 213 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 LGI1O95970 557 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 IFNA14P01570 189 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 FESP07332 822 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 HSD17B1P14061 328 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 ACVR2AP27037 513 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 OR1E2P47887 323 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 SLC6A8P48029 635 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 ZNF136P52737 540 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 TPD52P55327 224 aaPredicted RBP8.15□□□□□ -1.1
VCP-206ENST00000480327 COPZ1P61923 177 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 CRYZQ08257 329 aaKnown RBP8.15□□□□□ -1.1
VCP-206ENST00000480327 FOXD4Q12950 439 aaPredicted RBP8.15□□□□□ -1.1
VCP-206ENST00000480327 ZSWIM7Q19AV6 140 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 GLYR1Q49A26 553 aaPredicted RBP8.15□□□□□ -1.1
VCP-206ENST00000480327 WLSQ5T9L3 541 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 VASNQ6EMK4 673 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 AAGABQ6PD74 315 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 PLXDC2Q6UX71 529 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 CYP2R1Q6VVX0 501 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 CCDC121Q6ZUS5 278 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 VTCN1Q7Z7D3 282 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 TMEM200AQ86VY9 491 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 RBM45Q8IUH3 476 aaKnown RBP8.15□□□□□ -1.1
VCP-206ENST00000480327 GRAMD2AQ8IUY3 354 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 ZNF440Q8IYI8 595 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 EID3Q8N140 333 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 GTPBP8Q8N3Z3 284 aaPredicted RBP8.15□□□□□ -1.1
VCP-206ENST00000480327 OR52E4Q8NGH9 312 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 OR4D11Q8NGI4 311 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 RNF217Q8TC41 542 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 TMEM234Q8WY98 164 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 PROX1Q92786 737 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 ZBTB8AQ96BR9 441 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 SARAFQ96BY9 339 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 CCDC124Q96CT7 223 aaKnown RBP8.15□□□□□ -1.1
VCP-206ENST00000480327 ZNF559Q9BR84 538 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 BTBD10Q9BSF8 475 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 C1orf21Q9H246 121 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 KCNJ16Q9NPI9 418 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 ACER3Q9NUN7 267 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 ADPRHL2Q9NX46 363 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 PRDM4Q9UKN5 801 aa8.15□□□□□ -1.1
VCP-206ENST00000480327 FAM221AA4D161 298 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 CPSF4LA6NMK7 179 aaKnown RBP8.14□□□□□ -1.11
VCP-206ENST00000480327 TMEM229AB2RXF0 380 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 KDM4EB2RXH2 506 aaPredicted RBP8.14□□□□□ -1.11
VCP-206ENST00000480327 BCKDKO14874 412 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 GSC2O15499 205 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 TPST2O60704 377 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 CTAG2O75638 210 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
VCP-206ENST00000480327 ATP5HO75947 161 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 ACTL6AO96019 429 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 UQCRBP14927 111 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 ZNF17P17021 662 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 PTNP21246 168 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 ME2P23368 584 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 CHMP24386 653 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 PSMA4P25789 261 aaKnown RBP8.14□□□□□ -1.11
VCP-206ENST00000480327 HTR2AP28223 471 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 SHC1P29353 583 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 TACR3P29371 465 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 SFTPDP35247 375 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 EIF1P41567 113 aaKnown RBP8.14□□□□□ -1.11
VCP-206ENST00000480327 LHX2P50458 406 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 SUCLG1P53597 346 aaKnown RBP8.14□□□□□ -1.11
VCP-206ENST00000480327 CLDN20P56880 219 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 NCALDP61601 193 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 SELENOWP63302 87 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 MS4A2Q01362 244 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 NPTX1Q15818 432 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 NRF1Q16656 503 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 TMEM44Q2T9K0 475 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 DNAL1Q4LDG9 190 aa8.14□□□□□ -1.11
VCP-206ENST00000480327 NHSL2Q5HYW2 709 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms