RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 MEN1O00255 615 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 HCRTR2O43614 444 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 SCO2O43819 266 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 PTP4A3O75365 173 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 C1QTNF9P0C862 333 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 CCL4P13236 92 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 MYL12AP19105 171 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 LCN1P31025 176 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 GRK6P43250 576 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 ZNF117Q03924 483 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 RAB40BQ12829 278 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 TMEM44Q2T9K0 475 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 SLCO6A1Q86UG4 719 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 LNX2Q8N448 690 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 NANOGP1Q8N7R0 232 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 NFAM1Q8NET5 270 aaPredicted RBP13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 NACC2Q96BF6 587 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 TBL1XR1Q9BZK7 514 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 OR51E2Q9H255 320 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 SPEGQ15772 3267 aa13.31□□□□□ -0.28
PKNOX1-206ENST00000480179 IGKV1D-42A0A075B6H8 117 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 TRBV11-1A0A0K0K1C0 115 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 TMEM8BA6NDV4 472 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 CLPXO76031 633 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SLC6A6P31641 620 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SOX3P41225 446 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SLC9A3P48764 834 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ZFP36L1Q07352 338 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 TRA2AQ13595 282 aaKnown RBP eCLIP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 IL11RAQ14626 422 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SPHARQ15513 63 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 GXYLT1Q4G148 440 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 C3orf38Q5JPI3 329 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 FAM69BQ5VUD6 431 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 LRRC17Q8N6Y2 441 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ZNF563Q8TA94 476 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 PMEPA1Q969W9 287 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SPSB2Q99619 263 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 CHCHD6Q9BRQ6 235 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 LAT2Q9GZY6 243 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 AKIRIN1Q9H9L7 192 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 FGF20Q9NP95 211 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 H2AFY2Q9P0M6 372 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ICAM5Q9UMF0 924 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ZC3H12DA2A288 527 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 RIIAD1A6NNX1 92 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 NDUFB5O43674 189 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ONECUT2O95948 504 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SPINK2P20155 84 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 MST1P26927 711 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 HTR1FP30939 366 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ENTPD1P49961 510 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 PNLIPRP2P54317 469 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 DBPQ10586 325 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 FHL1Q13642 323 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 C1DQ13901 141 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SSX1Q16384 188 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 CCDC157Q569K6 752 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 RNLSQ5VYX0 342 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 NXNL2Q5VZ03 156 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 NIPAL3Q6P499 406 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 CPEB2Q7Z5Q1 589 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ATG4DQ86TL0 474 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 IGFN1Q86VF2 1251 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 BPHLQ86WA6 291 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 C10orf53Q8N6V4 93 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 APCDD1LQ8NCL9 501 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 C17orf47Q8NEP4 570 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 OR4F15Q8NGB8 312 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 OR5M3Q8NGP4 307 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 RHBDD1Q8TEB9 315 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ZNF524Q96C55 264 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ZHX1-C8orf76Q96EF9 292 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 WDR77Q9BQA1 342 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SCNM1Q9BWG6 230 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 SEMA4CQ9C0C4 833 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ZBTB20Q9HC78 741 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 MRPS18AQ9NVS2 196 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 CHCHD3Q9NX63 227 aaKnown RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 GPN3Q9UHW5 284 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
PKNOX1-206ENST00000480179 EXPH5Q8NEV8 1989 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 ALG1L2C9J202 215 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 CCRL2O00421 344 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 PPM1BO75688 479 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 OR7A10O76100 309 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 NADKO95544 446 aaPredicted RBP13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 NUDT14O95848 222 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 PNMTP11086 282 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 ITPKBP27987 946 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 EVI2BP34910 448 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 SLC6A8P48029 635 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 NRG3P56975 720 aa13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 RPS3AP61247 264 aaKnown RBP13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 SOWAHCQ53LP3 525 aaPredicted RBP13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 FAM199XQ6PEV8 388 aaPredicted RBP13.29□□□□□ -0.28
PKNOX1-206ENST00000480179 ADCK1Q86TW2 530 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms