RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 GSTT1P30711 240 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 CCR4P51679 360 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 POLR2HP52434 150 aaKnown RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 MAP2K6P52564 334 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 PRPS1P60891 318 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 SNTA1Q13424 505 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 SSPNQ14714 243 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 TRIP6Q15654 476 aaKnown RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 NTRK2Q16620 822 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 BTBD16Q32M84 506 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 CLEC12AQ5QGZ9 265 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 SLC30A6Q6NXT4 461 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ARHGAP11AQ6P4F7 1023 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 OPN5Q6U736 354 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 GRINAQ7Z429 371 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 MEX3DQ86XN8 651 aaKnown RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ERI1Q8IV48 349 aaKnown RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ANKK1Q8NFD2 765 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 OR13C2Q8NGS9 318 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 OR6S1Q8NH40 331 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 CT55Q8WUE5 264 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ST8SIA1Q92185 356 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 YIPF6Q96EC8 236 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 RNF31Q96EP0 1072 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 GPX7Q96SL4 187 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 RHNO1Q9BSD3 238 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 JAM3Q9BX67 310 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 GPR87Q9BY21 358 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 RTN4RQ9BZR6 473 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 YIPF3Q9GZM5 350 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 GPN2Q9H9Y4 310 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ZBTB20Q9HC78 741 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 FGF20Q9NP95 211 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 CMC2Q9NRP2 79 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 DNAJC27Q9NZQ0 273 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 DIMT1Q9UNQ2 313 aaKnown RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 FARSAQ9Y285 508 aaKnown RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 SLC6A5Q9Y345 797 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 LAMA1P25391 3075 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 NSG1A0A0A6YYJ2 146 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 C9orf172C9J069 976 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 WWP2O00308 870 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 SOCS6O14544 535 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 TP53I11O14683 189 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 ARPC3O15145 178 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 SCO2O43819 266 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 MAN1A2O60476 641 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 RAB36O95755 333 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 HPP00738 406 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 IFNGP01579 166 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 APEHP13798 732 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 FUT1P19526 365 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 MST1P26927 711 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 ITPKBP27987 946 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 TACR3P29371 465 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 C21orf33P30042 268 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 HTR1FP30939 366 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 MAP2K4P45985 399 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 GAS1P54826 345 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 FBXW4P57775 412 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 RPS4XP62701 263 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 RPS15P62841 145 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 TCF15Q12870 199 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 FHL1Q13642 323 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF74Q16587 644 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF791Q3KP31 576 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 C3orf38Q5JPI3 329 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 DPY19L2P2Q6ZN68 376 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 CCDC81Q6ZN84 652 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 TIPARPQ7Z3E1 657 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 SLC46A3Q7Z3Q1 461 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 OR11G2Q8NGC1 345 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 STK35Q8TDR2 534 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 GPR119Q8TDV5 335 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 C12orf43Q96C57 262 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 NMD3Q96D46 503 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 SPACA9Q96E40 222 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 COG8Q96MW5 612 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 RASL10BQ96S79 203 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 MESP1Q9BRJ9 268 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 IFT27Q9BW83 186 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 FKRPQ9H9S5 495 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 MCCC2Q9HCC0 563 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 CPNE5Q9HCH3 593 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 AMBNQ9NP70 447 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 PARD6AQ9NPB6 346 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 TAS2R10Q9NYW0 307 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 H2AFY2Q9P0M6 372 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 WARS2Q9UGM6 360 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 ENPP5Q9UJA9 477 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 KLHL21Q9UJP4 597 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF229Q9UJW7 825 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 TCFL5Q9UL49 500 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 HIF3AQ9Y2N7 669 aa10.04□□□□□ -0.8
VTI1A-204ENST00000480057 YARS2Q9Y2Z4 477 aaKnown RBP10.04□□□□□ -0.8
VTI1A-204ENST00000480057 RIIAD1A6NNX1 92 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 IMPA2O14732 288 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF354AO60765 605 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-204ENST00000480057 GABARAPO95166 117 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms