RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 PGFP49763 221 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 IL9RQ01113 521 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 NCBP1Q09161 790 aaKnown RBP3.95□□□□□ -1.78
RFC4-212ENST00000479307 ANKRD55Q3KP44 614 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 CENPPQ6IPU0 288 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 ARMCX5Q6P1M9 558 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 SPNS3Q6ZMD2 512 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 DPY19L2P2Q6ZN68 376 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 CDR2LQ86X02 465 aaPredicted RBP3.95□□□□□ -1.78
RFC4-212ENST00000479307 CCDC71Q8IV32 467 aaPredicted RBP3.95□□□□□ -1.78
RFC4-212ENST00000479307 SLC34A3Q8N130 599 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 RNF148Q8N7C7 305 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 FAM184AQ8NB25 1140 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 OR56B1Q8NGI3 324 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 GIMAP1Q8WWP7 306 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 SAMD8Q96LT4 415 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 ATOH8Q96SQ7 321 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 KCNK16Q96T55 309 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 NDUFAF3Q9BU61 184 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 RAB11FIP5Q9BXF6 653 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 KRT23Q9C075 422 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 RWDD1Q9H446 243 aaPredicted RBP3.95□□□□□ -1.78
RFC4-212ENST00000479307 TSPY26PQ9H489 355 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 GNB4Q9HAV0 340 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 SEC14L4Q9UDX3 406 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 BCAP29Q9UHQ4 241 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 EMCNQ9ULC0 261 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 SLC9A8Q9Y2E8 581 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 IKBKGQ9Y6K9 419 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 SLCO1B1Q9Y6L6 691 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 ATRQ13535 2644 aa3.95□□□□□ -1.78
RFC4-212ENST00000479307 MYOFQ9NZM1 2061 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 CITO14578 2027 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 A0A1W2PNU3 283 aaPredicted RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 ERICH4A6NGS2 130 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 TMEM110-MUSTN1A8MSY1 372 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 YKT6O15498 198 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 B4GALT5O43286 388 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 TGFAP01135 160 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 IGLV3-19P01714 112 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 HOXD4P09016 255 aaPredicted RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 SNRPCP09234 159 aaKnown RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 HSD17B1P14061 328 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 ATF6P18850 670 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 RABIFP47224 123 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 DUSP3P51452 185 aaPredicted RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 PDIA5Q14554 519 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 ZSWIM7Q19AV6 140 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 ACSF3Q4G176 576 aaPredicted RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 AGKQ53H12 422 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 SEL1L3Q68CR1 1132 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 GOLGA7Q7Z5G4 137 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 LUZP1Q86V48 1076 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 VPS36Q86VN1 386 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 AMZ2Q86W34 360 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 PYROXD2Q8N2H3 581 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 FAM71CQ8NEG0 241 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 ANKRD20A12PQ8NF67 263 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 FLVCR1-AS1Q8TAF5 88 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 HTR3CQ8WXA8 447 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 RBM18Q96H35 190 aaKnown RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 GABRG3Q99928 467 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 SOSTQ9BQB4 213 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 WRAP53Q9BUR4 548 aaKnown RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 ST6GALNAC5Q9BVH7 336 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 GPR174Q9BXC1 333 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 EGLN1Q9GZT9 426 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 TMEM231Q9H6L2 316 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 TM9SF3Q9HD45 589 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 ABCC13Q9NSE7 274 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 CNOT2Q9NZN8 540 aaKnown RBP3.94□□□□□ -1.78
RFC4-212ENST00000479307 TMCC3Q9ULS5 477 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 MYH10P35580 1976 aa3.94□□□□□ -1.78
RFC4-212ENST00000479307 SCN8AQ9UQD0 1980 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 A0A1B0GTH9 108 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 TEX48A0A1B0GUV7 120 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 CHMP2AO43633 222 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 STK17BO94768 372 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 PLEKHA8P1O95397 391 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 SEMA4FO95754 770 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 MT-ND1P03886 318 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 OR4Q2P0C623 313 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 HMGA1P17096 107 aaKnown RBP3.93□□□□□ -1.78
RFC4-212ENST00000479307 CCNA2P20248 432 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 SHC1P29353 583 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 NMT1P30419 496 aaKnown RBP3.93□□□□□ -1.78
RFC4-212ENST00000479307 TNFSF9P41273 254 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 SLC7A2P52569 658 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 SLC8A3P57103 927 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 KDSRQ06136 332 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 GABPB1Q06547 395 aaPredicted RBP3.93□□□□□ -1.78
RFC4-212ENST00000479307 MXD4Q14582 209 aaPredicted RBP3.93□□□□□ -1.78
RFC4-212ENST00000479307 PCK2Q16822 640 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 ZNF506Q5JVG8 444 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 TCHHL1Q5QJ38 904 aaPredicted RBP3.93□□□□□ -1.78
RFC4-212ENST00000479307 ATRAIDQ6UW56 229 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 ABRAXAS1Q6UWZ7 409 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 TIPARPQ7Z3E1 657 aaKnown RBP3.93□□□□□ -1.78
RFC4-212ENST00000479307 SLC25A42Q86VD7 318 aa3.93□□□□□ -1.78
RFC4-212ENST00000479307 EID2Q8N6I1 236 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms