RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLU7O95391 586 aaKnown RBP14.97□□□□□ -0.01
VIM-204ENST00000478746 PMS2P2O95744 297 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 KRT16P08779 473 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 TACSTD2P09758 323 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 UROSP10746 265 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 PGCP20142 388 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 GIFP27352 417 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 MAGEA8P43361 318 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 SLC16A1P53985 500 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 NAA20P61599 178 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 ACTG1P63261 375 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 CKAP4Q07065 602 aaKnown RBP14.97□□□□□ -0.01
VIM-204ENST00000478746 TP53BP2Q13625 1128 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 PDZK1Q5T2W1 519 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 KLHL24Q6TFL4 600 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 UGT2A3Q6UWM9 527 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 R3HCC1LQ7Z5L2 792 aaKnown RBP14.97□□□□□ -0.01
VIM-204ENST00000478746 GCDHQ92947 438 aaPredicted RBP14.97□□□□□ -0.01
VIM-204ENST00000478746 MTERF3Q96E29 417 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 DNAJA3Q96EY1 480 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 FMO2Q99518 471 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 TNFRSF12AQ9NP84 129 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 SLC7A10Q9NS82 523 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 SPIN1Q9Y657 262 aaPredicted RBP14.97□□□□□ -0.01
VIM-204ENST00000478746 KLF11O14901 512 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 DAOP14920 347 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 DDX5P17844 614 aaKnown RBP14.96□□□□□ -0.01
VIM-204ENST00000478746 PCMT1P22061 227 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 APOBEC1P41238 236 aaKnown RBP14.96□□□□□ -0.01
VIM-204ENST00000478746 COMPP49747 757 aaPredicted RBP14.96□□□□□ -0.01
VIM-204ENST00000478746 IDH3GP51553 393 aaPredicted RBP14.96□□□□□ -0.01
VIM-204ENST00000478746 OR2B6P58173 313 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 SKP2Q13309 424 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 RFTN2Q52LD8 501 aaPredicted RBP14.96□□□□□ -0.01
VIM-204ENST00000478746 CFAP157Q5JU67 520 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 RINLQ6ZS11 566 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 OR56A1Q8NGH5 318 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 ARL5BQ96KC2 179 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 FCRL1Q96LA6 429 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 SDF2Q99470 211 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 METTL17Q9H7H0 456 aaPredicted RBP14.96□□□□□ -0.01
VIM-204ENST00000478746 CA10Q9NS85 328 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 HDGFL3Q9Y3E1 203 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 PTGDR2Q9Y5Y4 395 aa14.96□□□□□ -0.01
VIM-204ENST00000478746 EXOC1LA0A1B0GW35 172 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 DNPH1O43598 174 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 CSTAP01040 98 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 OR4A8P0C604 315 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 MYL2P10916 166 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 CDH2P19022 906 aaPredicted RBP14.95□□□□□ -0.02
VIM-204ENST00000478746 MPGP29372 298 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 ASMTP46597 345 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 PPOXP50336 477 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 CDH15P55291 814 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 GPR68Q15743 365 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 SPDYE7PQ495Y7 208 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 TSPO2Q5TGU0 170 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 CLEC6AQ6EIG7 209 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 FRMD7Q6ZUT3 714 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 SEMA6DQ8NFY4 1073 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 IFT81Q8WYA0 676 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 SNX18Q96RF0 628 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 NMUR2Q9GZQ4 415 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 PLK3Q9H4B4 646 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 CTPS2Q9NRF8 586 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 GPATCH2Q9NW75 528 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 CHRNA9Q9UGM1 479 aa14.95□□□□□ -0.02
VIM-204ENST00000478746 IGHV1-18A0A0C4DH31 117 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 ANKRD28O15084 1053 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 PDE5AO76074 875 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 CRYAAP02489 173 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 ERCC1P07992 297 aaPredicted RBP14.94□□□□□ -0.02
VIM-204ENST00000478746 UBTFL6P0CB48 400 aaPredicted RBP14.94□□□□□ -0.02
VIM-204ENST00000478746 FKBP2P26885 142 aaKnown RBP14.94□□□□□ -0.02
VIM-204ENST00000478746 CLK1P49759 484 aaKnown RBP14.94□□□□□ -0.02
VIM-204ENST00000478746 DVL1P1P54792 670 aaPredicted RBP14.94□□□□□ -0.02
VIM-204ENST00000478746 EFNB3Q15768 340 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 ADIPOQQ15848 244 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 ZNF141Q15928 474 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 VHLLQ6RSH7 139 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 DEF8Q6ZN54 512 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 OR7A2PQ8NGA2 310 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 ZNF563Q8TA94 476 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 NEU4Q8WWR8 484 aaPredicted RBP14.94□□□□□ -0.02
VIM-204ENST00000478746 OR5P2Q8WZ92 322 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 OR7D2Q96RA2 312 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 CCDC106Q9BWC9 280 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 DCDC2Q9UHG0 476 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 ATP6V1HQ9UI12 483 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 FBXO9Q9UK97 447 aaPredicted RBP14.94□□□□□ -0.02
VIM-204ENST00000478746 SLC9A8Q9Y2E8 581 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 PCDHB14Q9Y5E9 798 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 FLVCR1Q9Y5Y0 555 aa14.94□□□□□ -0.02
VIM-204ENST00000478746 TMEM89A2RUT3 159 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 G3V2L1 256 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 RPL38P63173 70 aaKnown RBP14.93□□□□□ -0.02
VIM-204ENST00000478746 H3F3AP84243 136 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 HIKESHIQ53FT3 197 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 ZYG11AQ6WRX3 759 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 EIF3MQ7L2H7 374 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms