RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 FAM234BA2RU67 622 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 FRS3O43559 492 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 CYTIPO60759 359 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 PRG2P13727 222 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 STX1BP61266 288 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 LRRC74AQ0VAA2 488 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 BNIP2Q12982 314 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 STK11Q15831 433 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 ACKR1Q16570 336 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 GRINAQ7Z429 371 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 ZNF100Q8IYN0 542 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 GABRG1Q8N1C3 465 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 SLC43A2Q8N370 569 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 SLC38A5Q8WUX1 472 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 GTF2H4Q92759 462 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 MBD6Q96DN6 1003 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 TMEM19Q96HH6 336 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 C7orf26Q96N11 449 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 CCL19Q99731 98 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 PAIP1Q9H074 479 aaKnown RBP16.91■□□□□ 0.3
EPHB4-205ENST00000478459 SLAMF8Q9P0V8 285 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 OSGIN1Q9UJX0 560 aa16.91■□□□□ 0.3
EPHB4-205ENST00000478459 RAI1Q7Z5J4 1906 aaPredicted RBP16.91■□□□□ 0.3
EPHB4-205ENST00000478459 CLOCKO15516 846 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 GOSR1O95249 250 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 DBIP07108 87 aaKnown RBP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 RPS4Y1P22090 263 aaKnown RBP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 CSNK2A1P68400 391 aaPredicted RBP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 NKX6-1P78426 367 aaPredicted RBP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 HOXC5Q00444 222 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 BEX5Q5H9J7 111 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 SFRP5Q5T4F7 317 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 FUNDC1Q8IVP5 155 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 PEX5LQ8IYB4 626 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 UBE2J2Q8N2K1 259 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 CLIP4Q8N3C7 705 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 GOLGA6L1Q8N7Z2 621 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 PERPQ96FX8 193 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 SMR3AQ99954 134 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 EXOSC3Q9NQT5 275 aaKnown RBP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 ZNF443Q9Y2A4 671 aaPredicted RBP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 GPR52Q9Y2T5 361 aa16.9■□□□□ 0.3
EPHB4-205ENST00000478459 SPIN1Q9Y657 262 aaPredicted RBP16.9■□□□□ 0.3
EPHB4-205ENST00000478459 CFAP73A6NFT4 308 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 SMPD2O60906 423 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 GUSBP08236 651 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 TFPTP0C1Z6 253 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 PSMB1P20618 241 aaKnown RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 OR3A2P47893 321 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 PCYT1AP49585 367 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 POLR2HP52434 150 aaKnown RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 EPS8Q12929 822 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 TAB1Q15750 504 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 PAGE3Q5JUK9 113 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 ZNF704Q6ZNC4 412 aaPredicted RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 Q71RC1 249 aaPredicted RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 BHLHA15Q7RTS1 189 aaPredicted RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 GALNT5Q7Z7M9 940 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 MTDHQ86UE4 582 aaKnown RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 KRTAP1-3Q8IUG1 177 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 C10orf111Q8N326 155 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 STEAP2Q8NFT2 490 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 SLC25A43Q8WUT9 341 aaPredicted RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 NEUROG1Q92886 237 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 KISS1RQ969F8 398 aaPredicted RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 BCO1Q9HAY6 547 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 FANCFQ9NPI8 374 aa16.89■□□□□ 0.29
EPHB4-205ENST00000478459 INTS9Q9NV88 658 aaKnown RBP16.89■□□□□ 0.29
EPHB4-205ENST00000478459 A0A1W2PR80 420 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 CLIC1O00299 241 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 ZCCHC18P0CG32 403 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 IMPDH2P12268 514 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 ADSLP30566 484 aaPredicted RBP16.88■□□□□ 0.29
EPHB4-205ENST00000478459 NTF4P34130 210 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 CRISP3P54108 245 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 GNA13Q14344 377 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 AGKQ53H12 422 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 C9orf135Q5VTT2 229 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 ZHX1-C8orf76Q96EF9 292 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 TACO1Q9BSH4 297 aaKnown RBP16.88■□□□□ 0.29
EPHB4-205ENST00000478459 SLC25A37Q9NYZ2 338 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 NOSIPQ9Y314 301 aaKnown RBP16.88■□□□□ 0.29
EPHB4-205ENST00000478459 C2CD3Q4AC94 2353 aa16.88■□□□□ 0.29
EPHB4-205ENST00000478459 NIPBLQ6KC79 2804 aaeCLIP16.87■□□□□ 0.29
EPHB4-205ENST00000478459 CDHR4A6H8M9 788 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 ZNF716A6NP11 495 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 PPP3CBP16298 524 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 NCF2P19878 526 aaPredicted RBP16.87■□□□□ 0.29
EPHB4-205ENST00000478459 FPR1P21462 350 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 IGHV1-2P23083 117 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 FOXG1P55316 489 aaPredicted RBP16.87■□□□□ 0.29
EPHB4-205ENST00000478459 RGNQ15493 299 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 LIN52Q52LA3 116 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 ABLIM2Q6H8Q1 611 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 HDXQ7Z353 690 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 SERPINA11Q86U17 422 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 P3H2Q8IVL5 708 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 MSRB3Q8IXL7 192 aa16.87■□□□□ 0.29
EPHB4-205ENST00000478459 CMIPQ8IY22 773 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms