RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 WDR60Q8WVS4 1066 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 TMEM234Q8WY98 164 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 PPCDCQ96CD2 204 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 KCNS3Q9BQ31 491 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 THUMPD3Q9BV44 507 aaKnown RBP9.2□□□□□ -0.94
APTX-222ENST00000478279 FUT8Q9BYC5 575 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 RAB17Q9H0T7 212 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 MID1IP1Q9NPA3 183 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 RRAGDQ9NQL2 400 aaPredicted RBP9.2□□□□□ -0.94
APTX-222ENST00000478279 SLC7A10Q9NS82 523 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 ZCCHC3Q9NUD5 404 aaKnown RBP9.2□□□□□ -0.94
APTX-222ENST00000478279 ACER3Q9NUN7 267 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 SPEF1Q9Y4P9 236 aa9.2□□□□□ -0.94
APTX-222ENST00000478279 SPIN1Q9Y657 262 aaPredicted RBP9.2□□□□□ -0.94
APTX-222ENST00000478279 WNK2Q9Y3S1 2297 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 KLF11O14901 512 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 TMPRSS2O15393 492 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 AKAP10O43572 662 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 SEC22BO75396 215 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 PMS2P2O95744 297 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 CRYAAP02489 173 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 DDX5P17844 614 aaKnown RBP9.19□□□□□ -0.94
APTX-222ENST00000478279 SLC1A3P43003 542 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 MAGEA8P43361 318 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 LIMS1P48059 325 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 KHKP50053 298 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 PDE7AQ13946 482 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 CCNIQ14094 377 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 TSPO2Q5TGU0 170 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 SHQ1Q6PI26 577 aaKnown RBP9.19□□□□□ -0.94
APTX-222ENST00000478279 VHLLQ6RSH7 139 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 ADAMTS15Q8TE58 950 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 UBASH3BQ8TF42 649 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 TMEM186Q96B77 213 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 L3HYPDHQ96EM0 354 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 BOD1Q96IK1 185 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 SLC38A2Q96QD8 506 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 PAFAH2Q99487 392 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 DOK1Q99704 481 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 ZNF747Q9BV97 191 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 KATNB1Q9BVA0 655 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 ACTRT3Q9BYD9 372 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 LAT2Q9GZY6 243 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 GSTO2Q9H4Y5 243 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 OBP2BQ9NPH6 170 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 SIRT3Q9NTG7 399 aaPredicted RBP9.19□□□□□ -0.94
APTX-222ENST00000478279 HIF1ANQ9NWT6 349 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 NINJ2Q9NZG7 142 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 TMEM216Q9P0N5 145 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 SLC9A8Q9Y2E8 581 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 HDGFL3Q9Y3E1 203 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 GRIP1Q9Y3R0 1128 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 CCL27Q9Y4X3 112 aa9.19□□□□□ -0.94
APTX-222ENST00000478279 VSTM5A8MXK1 200 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 CYP7B1O75881 506 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 EFNA1P20827 205 aaPredicted RBP9.18□□□□□ -0.94
APTX-222ENST00000478279 PAX7P23759 505 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 PRPH2P23942 346 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 FKBP2P26885 142 aaKnown RBP9.18□□□□□ -0.94
APTX-222ENST00000478279 APOBEC1P41238 236 aaKnown RBP9.18□□□□□ -0.94
APTX-222ENST00000478279 CLK1P49759 484 aaKnown RBP9.18□□□□□ -0.94
APTX-222ENST00000478279 H3F3AP84243 136 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 NAAAQ02083 359 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 C2orf54Q08AI8 447 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 SKP2Q13309 424 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 HIKESHIQ53FT3 197 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 PDZK1Q5T2W1 519 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 ANKRD16Q6P6B7 361 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 SHISA2Q6UWI4 295 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 ZCCHC24Q8N2G6 241 aaKnown RBP9.18□□□□□ -0.94
APTX-222ENST00000478279 SVOPLQ8N434 492 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 OR4F15Q8NGB8 312 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 ARL5BQ96KC2 179 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 ZNF180Q9UJW8 692 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 FAF1Q9UNN5 650 aaPredicted RBP9.18□□□□□ -0.94
APTX-222ENST00000478279 USP22Q9UPT9 525 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 PCDHGB1Q9Y5G3 927 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 FLVCR1Q9Y5Y0 555 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 KCNE3Q9Y6H6 103 aa9.18□□□□□ -0.94
APTX-222ENST00000478279 POC1B-GALNT4F8VUJ3 575 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 LYNX1G3V0Z9 82 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 H3BQF6 201 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 hCG_2039718K7EN88 272 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 ANKRD28O15084 1053 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 URI1O94763 535 aaPredicted RBP9.17□□□□□ -0.94
APTX-222ENST00000478279 KRT16P08779 473 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 SNRPAP09012 282 aaKnown RBP9.17□□□□□ -0.94
APTX-222ENST00000478279 LYNX1P0DP58 116 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 SDC1P18827 310 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 CDH2P19022 906 aaPredicted RBP9.17□□□□□ -0.94
APTX-222ENST00000478279 NPR2P20594 1047 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 CCT3P49368 545 aaKnown RBP9.17□□□□□ -0.94
APTX-222ENST00000478279 OR2B6P58173 313 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 PDCD2Q16342 344 aaPredicted RBP9.17□□□□□ -0.94
APTX-222ENST00000478279 LCA5Q86VQ0 697 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 TEX29Q8N6K0 151 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 NUP37Q8NFH4 326 aa9.17□□□□□ -0.94
APTX-222ENST00000478279 CLHC1Q8NHS4 586 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms