RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 KLHDC3Q9BQ90 382 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 ALDH8A1Q9H2A2 487 aaPredicted RBP-0.39□□□□□ -2.47
CALD1-218ENST00000478075 CLMPQ9H6B4 373 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 HMG20AQ9NP66 347 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 TMEM161AQ9NX61 479 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 CHCHD3Q9NX63 227 aaKnown RBP-0.39□□□□□ -2.47
CALD1-218ENST00000478075 B3GNT2Q9NY97 397 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 SIGLEC7Q9Y286 467 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 DOCK10Q96BY6 2186 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 KMT2EQ8IZD2 1858 aa-0.39□□□□□ -2.47
CALD1-218ENST00000478075 IGHV5-10-1A0A0J9YXX1 117 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 IGKV2-29A2NJV5 120 aaPredicted RBP-0.4□□□□□ -2.47
CALD1-218ENST00000478075 E7EQL1 145 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 UBXN8O00124 270 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 UBE2CO00762 179 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 AHCYL1O43865 530 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 ZDHHC11BP0C7U3 371 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 SERPINA2P20848 420 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 CTNNA1P35221 906 aaKnown RBP-0.4□□□□□ -2.47
CALD1-218ENST00000478075 ZP4Q12836 540 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 DEFB134Q4QY38 66 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 SPATA1Q5VX52 437 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 LIPNQ5VXI9 398 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 TMIGD1Q6UXZ0 262 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 STHQ8IWL8 128 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 CNTN4Q8IWV2 1026 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 OR4F15Q8NGB8 312 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 ZNF502Q8TBZ5 544 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 SLC25A51Q9H1U9 297 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 MYOZ1Q9NP98 299 aaPredicted RBP-0.4□□□□□ -2.47
CALD1-218ENST00000478075 PFDN4Q9NQP4 134 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 GPATCH2LQ9NWQ4 482 aa-0.4□□□□□ -2.47
CALD1-218ENST00000478075 PCLOQ9Y6V0 5065 aa-0.41□□□□□ -2.47
CALD1-218ENST00000478075 TNXBP22105 4242 aa-0.41□□□□□ -2.47
CALD1-218ENST00000478075 FN1P02751 2386 aaKnown RBP-0.41□□□□□ -2.47
CALD1-218ENST00000478075 AHDC1Q5TGY3 1603 aaPredicted RBP-0.41□□□□□ -2.47
CALD1-218ENST00000478075 TENM4Q6N022 2769 aa-0.41□□□□□ -2.47
CALD1-218ENST00000478075 MBTPS2O43462 519 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 TPST2O60704 377 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 KLHL2O95198 593 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 SNAI1O95863 264 aaPredicted RBP-0.41□□□□□ -2.48
CALD1-218ENST00000478075 CENPBP07199 599 aaPredicted RBP-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ADRB2P07550 413 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 OPRK1P41145 380 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 KLK7P49862 253 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 RBX1P62877 108 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 KRTAP20-2Q3LI61 65 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ACSF3Q4G176 576 aaPredicted RBP-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ANKRD20A4Q4UJ75 823 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ANKRD20A2Q5SQ80 823 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ANKRD20A1Q5TYW2 823 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ANKRD20A3Q5VUR7 823 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 CASP12Q6UXS9 341 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 TMEM136Q6ZRR5 245 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 GPBP1Q86WP2 473 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 FBXL13Q8NEE6 735 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 OR10G3Q8NGC4 313 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 FAM110BQ8TC76 370 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ACTRT1Q8TDG2 376 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 VPS33AQ96AX1 596 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 CITED1Q99966 193 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 SPATA16Q9BXB7 569 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 FAM124BQ9H5Z6 455 aaPredicted RBP-0.41□□□□□ -2.48
CALD1-218ENST00000478075 GHRLQ9UBU3 117 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 ZNF639Q9UID6 485 aa-0.41□□□□□ -2.48
CALD1-218ENST00000478075 DMBT1Q9UGM3 2413 aaPredicted RBP-0.41□□□□□ -2.48
CALD1-218ENST00000478075 KMT2CQ8NEZ4 4911 aaKnown RBP-0.42□□□□□ -2.48
CALD1-218ENST00000478075 H3BMH7 237 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 LGI1O95970 557 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 GH1P01241 217 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 IGKV1-39P01597 117 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 IGKV1D-39P04432 117 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 KRTAP2-3P0C7H8 128 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 SLC35G4P0C7Q5 338 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 UBTFL1P0CB47 393 aaPredicted RBP-0.42□□□□□ -2.48
CALD1-218ENST00000478075 HRES1P13985 223 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 DCKP27707 260 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 PRKCIP41743 596 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 GYG1P46976 350 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 SLC11A1P49279 550 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 CALD1Q05682 793 aaKnown RBP-0.42□□□□□ -2.48
CALD1-218ENST00000478075 ARL6IP1Q15041 203 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 NKAIN2Q5VXU1 208 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 ACOT7LQ6ZUV0 252 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 NET1Q7Z628 596 aaPredicted RBP-0.42□□□□□ -2.48
CALD1-218ENST00000478075 TRIM69Q86WT6 500 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 C17orf50Q8WW18 174 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 VMP1Q96GC9 406 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 MS4A14Q96JA4 679 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 CYP2S1Q96SQ9 504 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 GAL3ST1Q99999 423 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 CHAC1Q9BUX1 264 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 KRTAP2-4Q9BYR9 128 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 KRTAP2-1Q9BYU5 128 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 RABEP2Q9H5N1 569 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 RNPEPL1Q9HAU8 725 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 C12orf10Q9HB07 376 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 NARFQ9UHQ1 456 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 CDH7Q9ULB5 785 aa-0.42□□□□□ -2.48
CALD1-218ENST00000478075 EIF3LQ9Y262 564 aaKnown RBP-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms