RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 IGF2-ASQ6U949 168 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 SATL1Q86VE3 508 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 ADGRG3Q86Y34 549 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 CDK20Q8IZL9 346 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 TCEANCQ8N8B7 351 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 WDSUB1Q8N9V3 476 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 TEX47Q8TBZ9 253 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 ASB15Q8WXK1 588 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 OSTF1Q92882 214 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 KTI12Q96EK9 354 aaPredicted RBP13.13□□□□□ -0.31
COL4A6-206ENST00000477085 FRMD6Q96NE9 622 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
COL4A6-206ENST00000477085 TMEM43Q9BTV4 400 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 UBQLN3Q9H347 655 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 C12orf10Q9HB07 376 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 MCCC2Q9HCC0 563 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 HHATLQ9HCP6 504 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 ANKRD10Q9NXR5 420 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 ERVK-18Q9QC07 812 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 WIF1Q9Y5W5 379 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 ZC3H12DA2A288 527 aaKnown RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 ENTPD6O75354 484 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 SLC2A10O95528 541 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 CH25HO95992 272 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 EEF1B2P24534 225 aaKnown RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 PCYT1AP49585 367 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 MLLT10P55197 1068 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TUBA4AP68366 448 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 MVKQ03426 396 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 POMZP3Q6PJE2 187 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 ZNF773Q6PK81 442 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 MDGA2Q7Z553 956 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 ZNF227Q86WZ6 799 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TMIGD2Q96BF3 282 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 SGTBQ96EQ0 304 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 MOGAT1Q96PD6 335 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 SLC19A3Q9BZV2 496 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 PLCXD1Q9NUJ7 323 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TUBA8Q9NY65 449 aaPredicted RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TAS2R10Q9NYW0 307 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 FBXL2Q9UKC9 423 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 CEP250Q9BV73 2442 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TMEM72A0PK05 275 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 BHLHE40O14503 412 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TLX2O43763 284 aaPredicted RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 ADRA2AP08913 450 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 GP1BBP13224 206 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 PRKCAP17252 672 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 RPL5P46777 297 aaKnown RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 GABARAPL2P60520 117 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TEKQ02763 1124 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 NADK2Q4G0N4 442 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 GXYLT1Q4G148 440 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 ACER2Q5QJU3 275 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 DCAF10Q5QP82 559 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 CASP12Q6UXS9 341 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 OAFQ86UD1 273 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 VASH2Q86V25 355 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 RAB43Q86YS6 212 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 FANK1Q8TC84 345 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 PAQR8Q8TEZ7 354 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TRUB1Q8WWH5 349 aaKnown RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 GGHQ92820 318 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 TAAR8Q969N4 342 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 THOC3Q96J01 351 aaKnown RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 SIGLEC11Q96RL6 698 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 POLDIP3Q9BY77 421 aaKnown RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 GPN2Q9H9Y4 310 aaPredicted RBP13.12□□□□□ -0.31
COL4A6-206ENST00000477085 CPNE5Q9HCH3 593 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 FKBP14Q9NWM8 211 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 DNAJC27Q9NZQ0 273 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 PPP4R1LQ9P1A2 415 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 PSORS1C1Q9UIG5 152 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 GPR52Q9Y2T5 361 aa13.12□□□□□ -0.31
COL4A6-206ENST00000477085 DCHS1Q96JQ0 3298 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 SHISA8B8ZZ34 492 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 TP53I11O14683 189 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 SURF4O15260 269 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 EFNA2O43921 213 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 FAM20BO75063 409 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 OR7A10O76100 309 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 DXOO77932 396 aaKnown RBP13.11□□□□□ -0.31
COL4A6-206ENST00000477085 WT1P19544 449 aaPredicted RBP13.11□□□□□ -0.31
COL4A6-206ENST00000477085 DLX5P56178 289 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 FOXK1P85037 733 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 DBPQ10586 325 aaPredicted RBP13.11□□□□□ -0.31
COL4A6-206ENST00000477085 ZNF74Q16587 644 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 PGGHGQ32M88 737 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 ZBED5Q49AG3 693 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 TMEM201Q5SNT2 666 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 XAF1Q6GPH4 301 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 TMEM81Q6P7N7 255 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 SMARCD3Q6STE5 483 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 KCTD8Q6ZWB6 473 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 GRINAQ7Z429 371 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 FAM26EQ8N5C1 309 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms