RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 A0A0A6YYC8 382 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 EFCAB7A8K855 629 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 I3L1I5 382 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 BCAT2O15382 392 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 PPP1R3DO95685 299 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 FASLGP48023 281 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 CRMP1Q14194 572 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 DEFB110Q30KQ9 67 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 ZC3H14Q6PJT7 736 aaKnown RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 VASH1Q7L8A9 365 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 ENKURQ8TC29 256 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 SMPDL3BQ92485 455 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 ART5Q96L15 291 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 FRMD6Q96NE9 622 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 DGAT2Q96PD7 388 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 RNF121Q9H920 327 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 MKKSQ9NPJ1 570 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 KLHL21Q9UJP4 597 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 NOX1Q9Y5S8 564 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 SLC9B1P1A6NJY1 282 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 B4DXG7 233 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 FOXS1O43638 330 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 NCR1O76036 304 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 NDUFB2O95178 105 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 NSA2O95478 260 aaKnown RBP15.12■□□□□ 0.01
TMEM53-208ENST00000476724 IGKV1D-16P01601 117 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 PRKAR1AP10644 381 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 HNRNPKP61978 463 aaKnown RBP eCLIP15.12■□□□□ 0.01
TMEM53-208ENST00000476724 CRYZQ08257 329 aaKnown RBP15.12■□□□□ 0.01
TMEM53-208ENST00000476724 INSL4Q14641 139 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 BCL2A1Q16548 175 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 MS4A15Q8N5U1 240 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 RCBTB1Q8NDN9 531 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 SENP5Q96HI0 755 aaPredicted RBP15.12■□□□□ 0.01
TMEM53-208ENST00000476724 OR2B2Q9GZK3 357 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 MCCC2Q9HCC0 563 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 DMDP11532 3685 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 A0A1B0GVT2 93 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 PPM1BO75688 479 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 PIAS2O75928 621 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 CTSBP07858 339 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 MYL9P24844 172 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 SSTR4P31391 388 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 MAP2K3P46734 347 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 AFF3P51826 1226 aaKnown RBP15.12■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF85Q03923 595 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 BIKQ13323 160 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 FHL1Q13642 323 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 QPRTQ15274 297 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 ATAD3CQ5T2N8 411 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 TEX19Q8NA77 164 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 DUSP18Q8NEJ0 188 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 OR4N2Q8NGD1 307 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 PEX11GQ96HA9 241 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 SNX18Q96RF0 628 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 MMP28Q9H239 520 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 ERVMER34-1Q9H9K5 563 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 UCK1Q9HA47 277 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 RBFOX1Q9NWB1 397 aaKnown RBP15.12■□□□□ 0.01
TMEM53-208ENST00000476724 HCN3Q9P1Z3 774 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 ICAM5Q9UMF0 924 aa15.12■□□□□ 0.01
TMEM53-208ENST00000476724 TNRC6BQ9UPQ9 1833 aaKnown RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 LMO7DNF2Z398 122 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 TFECO14948 347 aaPredicted RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 HRO43593 1189 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 ADAM11O75078 769 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 GALNSP34059 522 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 KIR2DL3P43628 341 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 GPR3P46089 330 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 FUT7Q11130 342 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF267Q14586 743 aaPredicted RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 SF3A2Q15428 464 aaKnown RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 ARL9Q6T311 187 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 PLET1Q6UQ28 207 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 LRRC28Q86X40 367 aaPredicted RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 C17orf82Q86X59 251 aaPredicted RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF440Q8IYI8 595 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 CADM2Q8N3J6 435 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 ABHD4Q8TB40 342 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 OIT3Q8WWZ8 545 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 TP53INP1Q96A56 240 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 SGTBQ96EQ0 304 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 C4orf36Q96KX1 117 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 ERMAPQ96PL5 475 aaPredicted RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 PELOQ9BRX2 385 aaKnown RBP15.11■□□□□ 0.01
TMEM53-208ENST00000476724 TMEM43Q9BTV4 400 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 CHRNA9Q9UGM1 479 aa15.11■□□□□ 0.01
TMEM53-208ENST00000476724 FAM25AB3EWG3 89 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 FAM25CB3EWG5 89 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 FAM25GB3EWG6 89 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 J3QLW9 94 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF749O43361 778 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 NGFRP08138 427 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF19P17023 458 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 HSD17B7P56937 341 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 NRG3P56975 720 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 P2RY14Q15391 338 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 IDNKQ5T6J7 187 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms