RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 HENMT1Q5T8I9 393 aaKnown RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 FAM69BQ5VUD6 431 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 VASNQ6EMK4 673 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 OR7E24Q6IFN5 339 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM92Q6UXU6 159 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 COMMD7Q86VX2 200 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 SIAH3Q8IW03 269 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 OR7G2Q8NG99 324 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 OR5M1Q8NGP8 315 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 C2orf15Q8WU43 125 aaKnown RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 SLC7A6Q92536 515 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 BPIFA2Q96DR5 249 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 PDLIM5Q96HC4 596 aaKnown RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 CNDP2Q96KP4 475 aaKnown RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF578Q96N58 590 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 MS4A7Q9GZW8 240 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 SLITRK2Q9H156 845 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 DPAGT1Q9H3H5 408 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 TCEAL2Q9H3H9 227 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 ACOXLQ9NUZ1 547 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 DKK3Q9UBP4 350 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 TBC1D29Q9UFV1 150 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 ERVK-19Q9WJR5 959 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 MRPS2Q9Y399 296 aaKnown RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 NOP16Q9Y3C1 178 aaKnown RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 PDCD11Q14690 1871 aaKnown RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 FNDC1Q4ZHG4 1894 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-204ENST00000476379 KIF26BQ2KJY2 2108 aa4.63□□□□□ -1.67
CCDC39-204ENST00000476379 A0A087WV48 116 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 MEX3AA1L020 520 aaKnown RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 UNC119BA6NIH7 251 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PATE3B3GLJ2 98 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 H7C0S8 307 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 XKRYO14609 159 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM127O75204 238 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 UBXN7O94888 489 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 EML2O95834 649 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 MPC1LP0DKB6 136 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 JUNBP17275 347 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 AKR1C4P17516 323 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PI3P19957 117 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 RAB3BP20337 219 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 CTHP32929 405 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 MMP12P39900 470 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 SLC6A9P48067 706 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PSPHP78330 225 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 SPOCK1Q08629 439 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PUS10Q3MIT2 529 aaKnown RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 FAM71E1Q6IPT2 247 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 LCN10Q6JVE6 187 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 APOOLQ6UXV4 268 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 LINC00346Q8IVM7 164 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PLPP7Q8NBV4 271 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 SMRP1Q8NCR6 262 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 OR52R1Q8NGF1 315 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 GPR119Q8TDV5 335 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PPP1R14AQ96A00 147 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 GTPBP2Q9BX10 602 aaKnown RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF471Q9BX82 626 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 POLDIP3Q9BY77 421 aaKnown RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 RETREG1Q9H6L5 497 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 HPF1Q9NWY4 346 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 CCDC59Q9P031 241 aaKnown RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PLEKHB1Q9UF11 243 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 HS3ST2Q9Y278 367 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 OR51B4Q9Y5P0 310 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 CHD5Q8TDI0 1954 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 ARPC4-TTLL3A0A0A6YYG9 625 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 FITM1A5D6W6 292 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 GFYI3L273 518 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 M0QYG6 137 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PRODHO43272 600 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF205O95201 554 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 APBB3O95704 486 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 IFNGP01579 166 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 MT-ND5P03915 603 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 JMJD7P0C870 316 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF250P15622 560 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 CBR1P16152 277 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 CXCL3P19876 107 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 CCNOP22674 350 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 RPS5P46782 204 aaKnown RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 S100A10P60903 97 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PPP2CBP62714 309 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 PPP2CAP67775 309 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 CSNK1G2P78368 415 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 MELKQ14680 651 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 HSD17B12Q53GQ0 312 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 KLHL26Q53HC5 615 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 WDR45BQ5MNZ6 344 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 C1QTNF12Q5T7M4 302 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 BICRALQ6AI39 1079 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 HTR3DQ70Z44 454 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 DPY19L4Q7Z388 723 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF101Q8IZC7 436 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 LRRC25Q8N386 305 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF615Q8N8J6 731 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 LINC01555Q8NAE3 123 aa4.62□□□□□ -1.67
CCDC39-204ENST00000476379 IL17RDQ8NFM7 739 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms