RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 HMBOX1Q6NT76 420 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 TMEM108Q6UXF1 575 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ADGRG3Q86Y34 549 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ZNF100Q8IYN0 542 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ELOA3Q8NG57 546 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ARL8AQ96BM9 186 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 MUS81Q96NY9 551 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 DHRS9Q9BPW9 319 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 CACNG6Q9BXT2 260 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 POLE3Q9NRF9 147 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 CBLN4Q9NTU7 201 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 EMC3Q9P0I2 261 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 CHRNA9Q9UGM1 479 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 SLC35A3Q9Y2D2 325 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 HDGFL3Q9Y3E1 203 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 YLPM1P49750 1951 aaKnown RBP11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ANK2Q01484 3957 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 H7C417 338 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 ITM2AO43736 263 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 OR12D1P0DN82 309 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 PTAFRP25105 342 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 CD40P25942 277 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 CLK1P49759 484 aaKnown RBP11.52□□□□□ -0.57
MRPL55-228ENST00000476267 SLC25A3Q00325 362 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 C6orf52Q5T4I8 152 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 PODNL1Q6PEZ8 512 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 C16orf62Q7Z3J2 963 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 CCDC103Q8IW40 242 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 WDR31Q8NA23 367 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 OR4A15Q8NGL6 344 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 OR52N5Q8NH56 324 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 PIGXQ8TBF5 258 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 RAB8BQ92930 207 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 APH1AQ96BI3 265 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 TESCQ96BS2 214 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 ROPN1LQ96C74 230 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 NEURL3Q96EH8 262 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 REPIN1Q9BWE0 567 aaKnown RBP11.52□□□□□ -0.57
MRPL55-228ENST00000476267 OR11A1Q9GZK7 315 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 C20orf27Q9GZN8 174 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 AKTIPQ9H8T0 292 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 YAE1D1Q9NRH1 226 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 EXD2Q9NVH0 621 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 TAS2R16Q9NYV7 291 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 MGAT4BQ9UQ53 548 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 NOSIPQ9Y314 301 aaKnown RBP11.52□□□□□ -0.57
MRPL55-228ENST00000476267 WDR45Q9Y484 360 aa11.52□□□□□ -0.57
MRPL55-228ENST00000476267 PRSS51A0A1B0GVH4 220 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 A0A1W2PR80 420 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 CLDN24A6NM45 220 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 A8MV72 311 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 AGR2O95994 175 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 DHRS4L1P0CG22 281 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 IMPDH2P12268 514 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 UQCRC2P22695 453 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 FKBP2P26885 142 aaKnown RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 KCNJ10P78508 379 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 LOXL1Q08397 574 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 CASP8Q14790 479 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 PDCD2Q16342 344 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 TMEM249Q2WGJ8 235 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 TNFAIP8L2Q6P589 184 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 ANKRD46Q86W74 232 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 PIAS4Q8N2W9 510 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 MUC15Q8N387 334 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 ZNF781Q8N8C0 355 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 XAGE5Q8WWM1 108 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 DNAJA3Q96EY1 480 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 ADAD1Q96M93 576 aaKnown RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 RHNO1Q9BSD3 238 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 ROPN1BQ9BZX4 212 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 ROPN1Q9HAT0 212 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 ASB6Q9NWX5 421 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 TRAPPC4Q9Y296 219 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 FLVCR1Q9Y5Y0 555 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 SPIN1Q9Y657 262 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-228ENST00000476267 ATRQ13535 2644 aa11.51□□□□□ -0.57
MRPL55-228ENST00000476267 CADP27708 2225 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 FAM234BA2RU67 622 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 HMGN4O00479 90 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 AP3D1O14617 1153 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 GPR171O14626 319 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 RPS4Y1P22090 263 aaKnown RBP11.5□□□□□ -0.57
MRPL55-228ENST00000476267 RYKP34925 604 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 ZNF83P51522 516 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 NUDT6P53370 316 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 DSCR9P59020 149 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 VSNL1P62760 191 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 VLDLRP98155 873 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 CHRNEQ04844 493 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 SPANXN4Q5MJ08 99 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 OR7E24Q6IFN5 339 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 ZNF544Q6NX49 715 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 HMGN2P46Q86SG4 172 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 LRRC34Q8IZ02 419 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 UBE2J2Q8N2K1 259 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 ZNF525Q8N782 197 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms