RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 OR4Q3Q8NH05 313 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 MARS2Q96GW9 593 aaKnown RBP9.8□□□□□ -0.84
ABCF1-205ENST00000475993 SUSD3Q96L08 255 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 MFFQ9GZY8 342 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 MED17Q9NVC6 651 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 PLEKHA6Q9Y2H5 1048 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 OR10H1Q9Y4A9 318 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 A0A087WUU8 490 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 LDLRAD4O15165 306 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 SEPT4O43236 478 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 RAD1O60671 282 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 MGMTP16455 207 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 ADCYAP1P18509 176 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 LAG3P18627 525 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 CSNK1DP48730 415 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 TAS2R50P59544 299 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 GMFBP60983 142 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 C2orf68Q2NKX9 166 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 CBARPQ8N350 705 aaPredicted RBP9.8□□□□□ -0.84
ABCF1-205ENST00000475993 OR52I2Q8NH67 350 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 RAB8BQ92930 207 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 SLC25A28Q96A46 364 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 PRRC1Q96M27 445 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 RSRP1Q9BUV0 290 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 SUCNR1Q9BXA5 334 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 MRPL37Q9BZE1 423 aaKnown RBP9.8□□□□□ -0.84
ABCF1-205ENST00000475993 SLC6A16Q9GZN6 736 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 SUV39H2Q9H5I1 410 aa9.8□□□□□ -0.84
ABCF1-205ENST00000475993 MRPL17Q9NRX2 175 aaKnown RBP9.8□□□□□ -0.84
ABCF1-205ENST00000475993 FAM212BQ9NTI7 297 aaPredicted RBP9.8□□□□□ -0.84
ABCF1-205ENST00000475993 TRAV1-2A0A0B4J238 106 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 GLTPD2A6NH11 291 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 F5H5P2 479 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 GABARAPH6UMI1 98 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 HMGN4O00479 90 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 SOCS6O14544 535 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 TGM5O43548 720 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 NDUFB6O95139 128 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 PCDH8O95206 1070 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 RAB3DO95716 219 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 ZNF35P13682 527 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 ADRB3P13945 408 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 ZNF44P15621 663 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 NOS3P29474 1203 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 STAT5AP42229 794 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 AP1S1P61966 158 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 TUSC3Q13454 348 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 CSRP2Q16527 193 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 ARSIQ5FYB1 569 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 C9orf131Q5VYM1 1079 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 FAM83HQ6ZRV2 1179 aaPredicted RBP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 EID2Q8N6I1 236 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 ZNF614Q8N883 585 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 POMGNT2Q8NAT1 580 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 TMEM185AQ8NFB2 350 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 OR51G2Q8NGK0 314 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 OR52B4Q8NGK2 314 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 OR6T1Q8NGN1 323 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 HMGB4Q8WW32 186 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 PIGQQ9BRB3 760 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 OR51I1Q9H343 314 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 KLHL31Q9H511 634 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 CACYBPQ9HB71 228 aaKnown RBP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 TAAR2Q9P1P5 351 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 PPP2R3BQ9Y5P8 575 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 PLXNB3Q9ULL4 1909 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 TMEM238LA0A1B0GVL6 79 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 EPPINO95925 133 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 OC90Q02509 493 aaPredicted RBP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 ELAVL2Q12926 359 aaKnown RBP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 TAF10Q12962 218 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 UBE2NLQ5JXB2 153 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 C10orf91Q5T1B1 145 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 HEPHL1Q6MZM0 1159 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 LINGO2Q7L985 606 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 SMAP2Q8WU79 429 aaPredicted RBP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 GCDHQ92947 438 aaPredicted RBP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 PGLYRP3Q96LB9 341 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 ATG101Q9BSB4 218 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 C2orf88Q9BSF0 95 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 METTL9Q9H1A3 318 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 TMPRSS5Q9H3S3 457 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 PRM3Q9NNZ6 103 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 METTL1Q9UBP6 276 aaKnown RBP9.79□□□□□ -0.84
ABCF1-205ENST00000475993 MMACHCQ9Y4U1 282 aa9.79□□□□□ -0.84
ABCF1-205ENST00000475993 IGLV3-16A0A075B6K0 115 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.78□□□□□ -0.84
ABCF1-205ENST00000475993 ABHD14A-ACY1A0A1B0GW23 586 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 ANKRD20A5PA0PJZ0 165 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 HEXAP06865 529 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 NFYBP25208 207 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 SGSHP51688 502 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 UBE2IP63279 158 aaKnown RBP9.78□□□□□ -0.84
ABCF1-205ENST00000475993 HTRA4P83105 476 aaPredicted RBP9.78□□□□□ -0.84
ABCF1-205ENST00000475993 BEX3Q00994 111 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 ZNF177Q13360 481 aaPredicted RBP9.78□□□□□ -0.84
ABCF1-205ENST00000475993 NAE1Q13564 534 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 ACSM3Q53FZ2 586 aa9.78□□□□□ -0.84
ABCF1-205ENST00000475993 PLEKHS1Q5SXH7 462 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms