RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 JSRP1Q96MG2 331 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-217ENST00000475693 MBOAT4Q96T53 435 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 RBM4BQ9BQ04 359 aaKnown RBP16.46■□□□□ 0.23
ATG4B-217ENST00000475693 BCL7BQ9BQE9 202 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 RBM4Q9BWF3 364 aaKnown RBP16.46■□□□□ 0.23
ATG4B-217ENST00000475693 USE1Q9NZ43 259 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 BLOC1S6Q9UL45 172 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 MSRB2Q9Y3D2 182 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 WDPCPO95876 746 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 IGFBP5P24593 272 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 PGBD2Q6P3X8 592 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 FAHD1Q6P587 224 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 C3orf49Q96BT1 292 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 FAM46AQ96IP4 442 aaKnown RBP16.46■□□□□ 0.23
ATG4B-217ENST00000475693 NAA50Q9GZZ1 169 aaKnown RBP16.46■□□□□ 0.23
ATG4B-217ENST00000475693 DSN1Q9H410 356 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 RIBC2Q9H4K1 309 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 GPR83Q9NYM4 423 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 ERGIC3Q9Y282 383 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 DSPP15924 2871 aaKnown RBP16.45■□□□□ 0.22
ATG4B-217ENST00000475693 LRRN3E7EW58 273 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 SOX14O95416 240 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 LCN1P31025 176 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 GPR4P46093 362 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 DNASE1L1P49184 302 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 BCAP31P51572 246 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 TOP3AQ13472 1001 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-217ENST00000475693 C8orf59Q8N0T1 100 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-217ENST00000475693 CENPSQ8N2Z9 138 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 LSMEM1Q8N8F7 131 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 WDSUB1Q8N9V3 476 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 RNF138Q8WVD3 245 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 GNRHR2Q96P88 292 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 DCBLD2Q96PD2 775 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 GABARAPL1Q9H0R8 117 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 KRT84Q9NSB2 600 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 ZNF182P17025 639 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-217ENST00000475693 CBLP22681 906 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 EEF1B2P24534 225 aaKnown RBP16.45■□□□□ 0.22
ATG4B-217ENST00000475693 COPZ1P61923 177 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 SLC22A10Q63ZE4 541 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 KLHL17Q6TDP4 642 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 GPR119Q8TDV5 335 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 SLC38A4Q969I6 547 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 IP6K3Q96PC2 410 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 TRIM2Q9C040 744 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 FAM117AQ9C073 453 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 SH2D2AQ9NP31 389 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 MEPEQ9NQ76 525 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-217ENST00000475693 DEPPQ9NTK1 212 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 PPP4R1LQ9P1A2 415 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 RPS6KB2Q9UBS0 482 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 AASSQ9UDR5 926 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 CSAG2Q9Y5P2 127 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 WIF1Q9Y5W5 379 aa16.45■□□□□ 0.22
ATG4B-217ENST00000475693 BSNQ9UPA5 3926 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 FAAHO00519 579 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 TP53I11O14683 189 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 ID4P47928 161 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 P2RX1P51575 399 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 C17orf67Q0P5P2 114 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 CDC20Q12834 499 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 RGS21Q2M5E4 152 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 ABHD17BQ5VST6 288 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 OR5W2Q8NH69 310 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 PAQR8Q8TEZ7 354 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 LRFN1Q9P244 771 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 MPDZO75970 2070 aa16.44■□□□□ 0.22
ATG4B-217ENST00000475693 FMO6PO60774 539 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 OPN1LWP04000 364 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 TACR3P29371 465 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 RFC3P40938 356 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 CYB561P49447 251 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 CLK3P49761 638 aaKnown RBP16.43■□□□□ 0.22
ATG4B-217ENST00000475693 QPRTQ15274 297 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 TMEM236Q5W0B7 351 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 FDCSPQ8NFU4 85 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 TMEM239Q8WW34 195 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 CCNL2Q96S94 520 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-217ENST00000475693 EXOSC3Q9NQT5 275 aaKnown RBP16.43■□□□□ 0.22
ATG4B-217ENST00000475693 KLHL1Q9NR64 748 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 IL20RAQ9UHF4 553 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 ITGB1BP2Q9UKP3 347 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 PINLYPA6NC86 204 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 CDC42EP2O14613 210 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 ELK4P28324 431 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 SMIM11AP58511 58 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 PSPHP78330 225 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 TUBA3EQ6PEY2 450 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 ZNF613Q6PF04 617 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 SPARTQ8N0X7 666 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 ZNF248Q8NDW4 579 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 ACOT11Q8WXI4 607 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-217ENST00000475693 THAP4Q8WY91 577 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 FAM122AQ96E09 287 aa16.43■□□□□ 0.22
ATG4B-217ENST00000475693 ZNF552Q9H707 407 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-217ENST00000475693 CHP2O43745 196 aa16.42■□□□□ 0.22
ATG4B-217ENST00000475693 EIF4E2O60573 245 aaKnown RBP16.42■□□□□ 0.22
ATG4B-217ENST00000475693 NEURL1O76050 574 aa16.42■□□□□ 0.22
ATG4B-217ENST00000475693 MAKP20794 623 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms