RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 DTNAQ9Y4J8 743 aa13.81□□□□□ -0.2
SRRT-209ENST00000474896 GPR45Q9Y5Y3 372 aa13.81□□□□□ -0.2
SRRT-209ENST00000474896 CUBNO60494 3623 aa13.81□□□□□ -0.2
SRRT-209ENST00000474896 IGHV4-30-2A0A087WSY4 118 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 FAM234BA2RU67 622 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 ABCD4O14678 606 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 ANKRD28O15084 1053 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 CYTIPO60759 359 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 LAMP1P11279 417 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 GGT1P19440 569 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 PRPS1L1P21108 318 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 IGHV1-2P23083 117 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 CDH11P55287 796 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 CLDN8P56748 225 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 SELENBP1Q13228 472 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 NRF1Q16656 503 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 GSTA3Q16772 222 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 SLC25A53Q5H9E4 307 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 TIMM23BQ5SRD1 257 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 AGAP6Q5VW22 663 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 SPATA21Q7Z572 469 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 RIMKLAQ8IXN7 391 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 ZNF100Q8IYN0 542 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 OR5W2Q8NH69 310 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 OR5B2Q96R09 309 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 DPY30Q9C005 99 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 RABEP2Q9H5N1 569 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 NPAP1Q9NZP6 1156 aa13.8□□□□□ -0.2
SRRT-209ENST00000474896 ZNF724A8MTY0 619 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 SCAMP2O15127 329 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 SMAD9O15198 467 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 ZNF264O43296 627 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 SNX3O60493 162 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 EIF4E2O60573 245 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 PGM3O95394 542 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 DDX5P17844 614 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 RPL3P39023 403 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 NUDT6P53370 316 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 NME5P56597 212 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 TP53BP2Q13625 1128 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 QPRTQ15274 297 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 SPDYE7PQ495Y7 208 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 PDCD4Q53EL6 469 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 GALNT5Q7Z7M9 940 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 P2RY8Q86VZ1 359 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 TMCO5AQ8N6Q1 288 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 TOR1AIP2Q8NFQ8 470 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 OR10H5Q8NGA6 315 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 OR56A1Q8NGH5 318 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 OR5P2Q8WZ92 322 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 ADAD1Q96M93 576 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 QRSL1Q9H0R6 528 aaKnown RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 SDR39U1Q9NRG7 319 aaPredicted RBP13.79□□□□□ -0.2
SRRT-209ENST00000474896 GPATCH2Q9NW75 528 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 TRIM33Q9UPN9 1127 aa13.79□□□□□ -0.2
SRRT-209ENST00000474896 E7EQL1 145 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 NPIPB9F8W1W9 429 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 H6PDO95479 791 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 NCF2P19878 526 aaPredicted RBP13.78□□□□□ -0.2
SRRT-209ENST00000474896 MRPL19P49406 292 aaKnown RBP13.78□□□□□ -0.2
SRRT-209ENST00000474896 CCR4P51679 360 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 STX1BP61266 288 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 UFM1P61960 85 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 CBFBQ13951 182 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 TIGD2Q4W5G0 525 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 METTL21CQ5VZV1 264 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 ZNF433Q8N7K0 673 aaPredicted RBP13.78□□□□□ -0.2
SRRT-209ENST00000474896 PSMA8Q8TAA3 256 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 RADILQ96JH8 1075 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 TEX37Q96LM6 180 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 TNFRSF13CQ96RJ3 184 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
SRRT-209ENST00000474896 CACNG6Q9BXT2 260 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 ZIM2Q9NZV7 527 aa13.78□□□□□ -0.2
SRRT-209ENST00000474896 YLPM1P49750 1951 aaKnown RBP13.78□□□□□ -0.2
SRRT-209ENST00000474896 A0A096LNT2 108 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 OR5H1A6NKK0 313 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 ETV2O00321 342 aaPredicted RBP13.77□□□□□ -0.21
SRRT-209ENST00000474896 PHF1O43189 567 aaPredicted RBP13.77□□□□□ -0.21
SRRT-209ENST00000474896 CYP7B1O75881 506 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 C6orf47O95873 294 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 IGHV3-9P01782 118 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 KRT16P08779 473 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 UBL4AP11441 157 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 COX5AP20674 150 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 TTKP33981 857 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 DIO1P49895 249 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 ATP4BP51164 291 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 CLNS1AP54105 237 aaKnown RBP13.77□□□□□ -0.21
SRRT-209ENST00000474896 DSCR9P59020 149 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 SQLEQ14534 574 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 RAB35Q15286 201 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 TMEM249Q2WGJ8 235 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 PDZK1Q5T2W1 519 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 C6orf52Q5T4I8 152 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 SLC22A25Q6T423 547 aa13.77□□□□□ -0.21
SRRT-209ENST00000474896 CLEC2AQ6UVW9 174 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms