RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 POU4F1Q01851 419 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 PMPCAQ10713 525 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 GRB14Q14449 540 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 SLC36A2Q495M3 483 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 GDF6Q6KF10 455 aaPredicted RBP3.21□□□□□ -1.9
UBR3-208ENST00000474426 TEX261Q6UWH6 196 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 LINC00299Q6ZSB3 139 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 FAM214BQ7L5A3 538 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 FAM220AQ7Z4H9 259 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 SCD5Q86SK9 330 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 ADIPOR2Q86V24 386 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 OR1L6Q8NGR2 347 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 OR8U1Q8NH10 309 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 OR5AK3PQ8NH89 298 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 TCTN2Q96GX1 697 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 CAPNS2Q96L46 248 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 C12orf42Q96LP6 360 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 ZNF75AQ96N20 296 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 SLC6A18Q96N87 628 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 PHB2Q99623 299 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 SDHCQ99643 169 aaPredicted RBP3.21□□□□□ -1.9
UBR3-208ENST00000474426 COMMD4Q9H0A8 199 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 RAB9BQ9NP90 201 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 SPAG4Q9NPE6 437 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 SS18L2Q9UHA2 77 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 GNG8Q9UK08 70 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 PITPNC1Q9UKF7 332 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 VPREB3Q9UKI3 123 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 FBXO7Q9Y3I1 522 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 YIPF1Q9Y548 306 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 U3KQ87 197 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 HECW2Q9P2P5 1572 aa3.21□□□□□ -1.9
UBR3-208ENST00000474426 LRRC7Q96NW7 1537 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SDR42E2A6NKP2 422 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CGB1A6NKQ9 187 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 C17orf105B2RV13 164 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 EEF2KO00418 725 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 BHLHE40O14503 412 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 DHHO43323 396 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 RPLP1P05386 114 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 BPGMP07738 259 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 EPXP11678 715 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FOLR2P14207 255 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 UCHL3P15374 230 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CHI3L1P36222 383 aaPredicted RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 OPRL1P41146 370 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 KIR3DL1P43629 444 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 NPBWR2P48146 333 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CRISP1P54107 249 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TAS2R41P59536 307 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CD81P60033 236 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 RELBQ01201 579 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 KRT33BQ14525 404 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 MAPK11Q15759 364 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 VAMP3Q15836 100 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CYP51A1Q16850 503 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 RBM48Q5RL73 367 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 UTF1Q5T230 341 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LRIF1Q5T3J3 769 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 DCAF12L2Q5VW00 463 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 KDM4DQ6B0I6 523 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SLCO4C1Q6ZQN7 724 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LANCL3Q6ZV70 420 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 Q7L0L9 218 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 WFDC8Q8IUA0 241 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CRLF3Q8IUI8 442 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SIAH3Q8IW03 269 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TMEM123Q8N131 208 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LILRA2Q8N149 483 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SYS1Q8N2H4 156 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 OR52L2PQ8NGH6 319 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 OR2T11Q8NH01 316 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 COQ2Q96H96 371 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SFRP2Q96HF1 295 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ERGIC2Q96RQ1 377 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SLC38A3Q99624 504 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 AIF1LQ9BQI0 150 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 GPR174Q9BXC1 333 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CLEC4MQ9H2X3 399 aaPredicted RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 CARS2Q9HA77 564 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 SERHLQ9NQF3 203 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ZNF391Q9UJN7 358 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ANGPT4Q9Y264 503 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SLC6A5Q9Y345 797 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ARL5AQ9Y689 179 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FLT4P35916 1363 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 MAGI2Q86UL8 1455 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 KDM6BO15054 1643 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ZCWPW2A0A1B0GU75 182 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 A0A1W2PR48 441 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 C5orf58C9J3I9 102 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 AQP7O14520 342 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TSPAN12O95859 305 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 IGSF6O95976 241 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 IFNA17P01571 189 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 T-ENOLP0DO92 83 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 MMP9P14780 707 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 PRDX2P32119 198 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TTPAP49638 278 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ERVPABLB-1P60509 514 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms