RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DUX4L6P0CJ89 424 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 DUX4L7P0CJ90 424 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 MAPK3P27361 379 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 FNTBP49356 437 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 P2RX1P51575 399 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 TGM3Q08188 693 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 RPE65Q16518 533 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 TCTN1Q2MV58 587 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF750Q32MQ0 723 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 LCTLQ6UWM7 567 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 FCRLAQ7L513 359 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 TMEM17Q86X19 198 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 CAMKVQ8NCB2 501 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 SMIM19Q96E16 107 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 TRMT2BQ96GJ1 504 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 BBS4Q96RK4 519 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 GFI1Q99684 422 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 NRIP3Q9NQ35 241 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 EQTNQ9NQ60 294 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 DUX4Q9UBX2 424 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 LAMA2P24043 3122 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 UNC119BA6NIH7 251 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 OR5F1O95221 314 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 ELNP15502 786 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 RPA2P15927 270 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 ART1P52961 327 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 GMFBP60983 142 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 SERTAD2Q14140 314 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 KRT33BQ14525 404 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 AGERQ15109 404 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 PRAMEF8Q5VWM4 474 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 PRAMEF7Q5VXH5 474 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 CST9Q5W186 159 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 NUDT18Q6ZVK8 323 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 SLC36A1Q7Z2H8 476 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 UBE3DQ7Z6J8 389 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 C11orf96Q7Z7L8 435 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 TRAPPC5Q8IUR0 188 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 CMTM8Q8IZV2 173 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 LNX2Q8N448 690 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF461Q8TAF7 563 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 SLC25A28Q96A46 364 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 CMC2Q9NRP2 79 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 KLHL28Q9NXS3 571 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 RASL12Q9NYN1 266 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 CTSFQ9UBX1 484 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 TAC3Q9UHF0 121 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 NDUFS4O43181 175 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 ERAL1O75616 437 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 ATG12O94817 140 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 ZIC2O95409 532 aaPredicted RBP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 GYPBP06028 91 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 PRKAR2AP13861 404 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 DPP4P27487 766 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 CLDN12P56749 244 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 POLR2GP62487 172 aaKnown RBP eCLIP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 CDK5R1Q15078 307 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 TMEM69Q5SWH9 247 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 STPG1Q5TH74 334 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 RAB11FIP2Q7L804 512 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 IFNL1Q8IU54 200 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 OR2AK2Q8NG84 335 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 MYLIPQ8WY64 445 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 OR7D2Q96RA2 312 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 SIDT1Q9NXL6 827 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 OR6C74A6NCV1 312 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 GPR31O00270 319 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 CLTBP09497 229 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 BMP7P18075 431 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 ACHEP22303 614 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 NTSP30990 170 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 HCCSP53701 268 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 PPP2CBP62714 309 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 RPS15P62841 145 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 PPP2CAP67775 309 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 SORDQ00796 357 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 FOXK2Q01167 660 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 DUSP2Q05923 314 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 TMEM64Q6YI46 380 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 THSD4Q6ZMP0 1018 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 CYB561A3Q8NBI2 242 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 TCEAL4Q96EI5 215 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 SCLYQ96I15 445 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 CYB5R1Q9UHQ9 305 aa17.19■□□□□ 0.34
ECHDC1-214ENST00000474289 HEATR5BQ9P2D3 2071 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 PQLC2LA1A4F0 135 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 FAM86C2PA6NEL3 165 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 IFITM5A6NNB3 132 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 OGG1O15527 345 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 FCMRO60667 390 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF254O75437 659 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 RASGRP1O95267 797 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 MAKP20794 623 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 PRKCZQ05513 592 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF528Q3MIS6 628 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 HTR3DQ70Z44 454 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 RNF180Q86T96 592 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 C17orf64Q86WR6 236 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms