RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RPL32P62910 135 aaKnown RBP3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SLC10A7Q0GE19 358 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ELAVL3Q14576 367 aaKnown RBP3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SFT2D3Q587I9 215 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 LIPNQ5VXI9 398 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 LEMD1Q68G75 181 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ZYG11AQ6WRX3 759 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF600Q6ZNG1 722 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SLC47A2Q86VL8 602 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SERPINA9Q86WD7 417 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 FAM83FQ8NEG4 500 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-212ENST00000473961 C17orf47Q8NEP4 570 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 OR9A4Q8NGU2 314 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ITLN1Q8WWA0 313 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 LZICQ8WZA0 190 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 NT5C3BQ969T7 300 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 CFAP53Q96M91 514 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 NPY6RQ99463 290 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 CITED1Q99966 193 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 RAB34Q9BZG1 259 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 TSGA10Q9BZW7 698 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SLC40A1Q9NP59 571 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ETNK2Q9NVF9 386 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 MDFICQ9P1T7 246 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SLC2A6Q9UGQ3 507 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ADAM28Q9UKQ2 775 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 CA5BQ9Y2D0 317 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 NPTNQ9Y639 398 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 EVC2Q86UK5 1308 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 TTC21AQ8NDW8 1320 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 METP08581 1390 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 CDC42BPAQ5VT25 1732 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 MAGI3Q5TCQ9 1506 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 IGKV3D-15A0A087WSY6 115 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 LRP5LA4QPB2 252 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 OR52A4PA6NMU1 304 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 SNTNA6NMZ2 147 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 H3BMQ9 156 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 NDUFAB1O14561 156 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 MED7O43513 233 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 TIMM8AO60220 97 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 MGRN1O60291 552 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 STX10O60499 249 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 AP2A1O95782 977 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 RENP00797 406 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CA1P00915 261 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 PIGRP01833 764 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 HOXD4P09016 255 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 TROVE2P10155 538 aaKnown RBP eCLIP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 ANXA13P27216 316 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CD80P33681 288 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 P2RY1P47900 373 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 HNRNPA3P51991 378 aaKnown RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 PLK1P53350 603 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 SUCLG1P53597 346 aaKnown RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 PLD1Q13393 1074 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 IDI1Q13907 227 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 SERTAD2Q14140 314 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 WHAMMP3Q1A5X7 153 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 HIGD2BQ4VC39 106 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CTSL3PQ5NE16 218 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 PRAMEF5Q5TYX0 476 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 PRAMEF6Q5VXH4 476 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 OR4F3Q6IEY1 312 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 C2orf66Q6UXQ4 117 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 BZW1Q7L1Q6 419 aaKnown RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC148Q8NFR7 591 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 OR2T33Q8NG76 320 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 OR8J1Q8NGP2 316 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 SLC2A14Q8TDB8 520 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 RNF139Q8WU17 664 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 PPP1R14BQ96C90 147 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 RASD2Q96D21 266 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 IFT74Q96LB3 600 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 MCCC1Q96RQ3 725 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 TSC22D3Q99576 134 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 VGLL1Q99990 258 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 TSSK1BQ9BXA7 367 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 SPATA16Q9BXB7 569 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 GON7Q9BXV9 100 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 API5Q9BZZ5 524 aaKnown RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 TRIM4Q9C037 500 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 MAGT1Q9H0U3 335 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 SLITRK2Q9H156 845 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CENPHQ9H3R5 247 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 NHEJ1Q9H9Q4 299 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 RAB18Q9NP72 206 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 FANCFQ9NPI8 374 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 BFARQ9NZS9 450 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 WRAP73Q9P2S5 460 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CFAP45Q9UL16 551 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 SCML2Q9UQR0 700 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 AK6Q9Y3D8 172 aaKnown RBP3.36□□□□□ -1.87
BRCA1-212ENST00000473961 N6AMT1Q9Y5N5 214 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CC2D2AQ9P2K1 1620 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 CUL7Q14999 1698 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 PBRM1Q86U86 1689 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 NUP155O75694 1391 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms