RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 AQP8O94778 261 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 MFN2O95140 757 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 PGCP20142 388 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 SFTPDP35247 375 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 EIF1P41567 113 aaKnown RBP11.76□□□□□ -0.53
TPM3-216ENST00000473036 IDH2P48735 452 aaKnown RBP11.76□□□□□ -0.53
TPM3-216ENST00000473036 SLC25A3Q00325 362 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 DUSP7Q16829 419 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 CYP51A1Q16850 503 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 INTS11Q5TA45 600 aaKnown RBP11.76□□□□□ -0.53
TPM3-216ENST00000473036 RINLQ6ZS11 566 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 ADGRG3Q86Y34 549 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 LACC1Q8IV20 430 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 SLC15A3Q8IY34 581 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 SMYD1Q8NB12 490 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 HIPK4Q8NE63 616 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 ATP6V1C2Q8NEY4 427 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 OR4D11Q8NGI4 311 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 OR10Q1Q8NGQ4 319 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 OR10D3Q8NH80 312 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 LILRB4Q8NHJ6 448 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 FNDC9Q8TBE3 224 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 ST8SIA1Q92185 356 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 TAMM41Q96BW9 452 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 SLC7A6OSQ96CW6 309 aaPredicted RBP11.76□□□□□ -0.53
TPM3-216ENST00000473036 CDRT15Q96T59 188 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 SPOCK3Q9BQ16 436 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 PINK1Q9BXM7 581 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 ABCD2Q9UBJ2 740 aa11.76□□□□□ -0.53
TPM3-216ENST00000473036 NIPBLQ6KC79 2804 aaeCLIP11.75□□□□□ -0.536e-7■■■□□ 15
TPM3-216ENST00000473036 A0A1W2PNR3 127 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 C5orf58C9J3I9 102 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 M0QX08 132 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 FAAHO00519 579 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 NME4O00746 187 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 GSC2O15499 205 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 CXCL13O43927 109 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 CLDN14O95500 239 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 IFNA14P01570 189 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 OPN1SWP03999 348 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 HSD17B1P14061 328 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 HOXB6P17509 224 aaKnown RBP11.75□□□□□ -0.53
TPM3-216ENST00000473036 CD247P20963 164 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 ME2P23368 584 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 HTR2AP28223 471 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 ELK4P28324 431 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 CHRNB4P30926 498 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 PRKAR1BP31321 381 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 PCGF2P35227 344 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 GCKP35557 465 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 MERTKQ12866 999 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 BNIP2Q12982 314 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 VEZF1Q14119 521 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 LARS2Q15031 903 aaKnown RBP11.75□□□□□ -0.53
TPM3-216ENST00000473036 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 VMACQ2NL98 169 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 TMEM176BQ3YBM2 270 aaPredicted RBP11.75□□□□□ -0.53
TPM3-216ENST00000473036 DHRS4L2Q6PKH6 230 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 ASRGL1Q7L266 308 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 TSPYL5Q86VY4 417 aaPredicted RBP11.75□□□□□ -0.53
TPM3-216ENST00000473036 ZNF295-AS1Q8N0V1 137 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 GCNT2Q8N0V5 402 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 MEIOBQ8N635 442 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 C11orf65Q8NCR3 313 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 OR2V1Q8NHB1 315 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 WNT2BQ93097 391 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 DTNBP1Q96EV8 351 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 DNAJA3Q96EY1 480 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 REXO5Q96IC2 774 aaKnown RBP11.75□□□□□ -0.53
TPM3-216ENST00000473036 KLHL15Q96M94 604 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 SPATA5L1Q9BVQ7 753 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 ADAM19Q9H013 955 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 ALG2Q9H553 416 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 CACYBPQ9HB71 228 aaKnown RBP11.75□□□□□ -0.53
TPM3-216ENST00000473036 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
TPM3-216ENST00000473036 OSGIN1Q9UJX0 560 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 IFT52Q9Y366 437 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 FREM1Q5H8C1 2179 aa11.75□□□□□ -0.53
TPM3-216ENST00000473036 TMEM72A0PK05 275 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 ZC3H12DA2A288 527 aaKnown RBP11.74□□□□□ -0.53
TPM3-216ENST00000473036 FAM90A27PA6NNH2 459 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 FAM47E-STBD1D6RA91 191 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 TNFSF13O75888 250 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 RCBTB2O95199 551 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 EIF1AXP47813 144 aaKnown RBP11.74□□□□□ -0.53
TPM3-216ENST00000473036 SLC7A2P52569 658 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 NCALDP61601 193 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 SELENBP1Q13228 472 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 PON3Q15166 354 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 NPTX1Q15818 432 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 CCDC80Q76M96 950 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 GRINAQ7Z429 371 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 RBM45Q8IUH3 476 aaKnown RBP11.74□□□□□ -0.53
TPM3-216ENST00000473036 EID3Q8N140 333 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 OR2T12Q8NG77 320 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 ZNF563Q8TA94 476 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
TPM3-216ENST00000473036 ARL5BQ96KC2 179 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 KCTD14Q9BQ13 255 aaPredicted RBP11.74□□□□□ -0.53
TPM3-216ENST00000473036 THTPAQ9BU02 230 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms