RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CLDN24A6NM45 220 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 TRPC5OSA6NMA1 111 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 HDAC3O15379 428 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 SNNO75324 88 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-203ENST00000472892 PMS2P2O95744 297 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 CD3EP07766 207 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 SLC18A1P54219 525 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 SYPL1Q16563 259 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 ABLIM2Q6H8Q1 611 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 DNAJC14Q6Y2X3 702 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-203ENST00000472892 LRRC74BQ6ZQY2 392 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF621Q6ZSS3 439 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 CMIPQ8IY22 773 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 ARFGAP2Q8N6H7 521 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 ANKRD42Q8N9B4 389 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 CNOT9Q92600 299 aaKnown RBP13.53□□□□□ -0.24
VTI1A-203ENST00000472892 PMM1Q92871 262 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 ARL5BQ96KC2 179 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 INPP5KQ9BT40 448 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 SLC38A1Q9H2H9 487 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 WDR55Q9H6Y2 383 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-203ENST00000472892 MTHFD2LQ9H903 347 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-203ENST00000472892 LAMP3Q9UQV4 416 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 HDGFL3Q9Y3E1 203 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 DPRXA6NFQ7 191 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 ZNF716A6NP11 495 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 OVOL3O00110 214 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 DNPH1O43598 174 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 LYZL6O75951 148 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 PGM3O95394 542 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 CHRM4P08173 479 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 DANCRP0C864 163 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 TFPIP10646 304 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 COX5AP20674 150 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 IGHV1-2P23083 117 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 EPHA3P29320 983 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 CDKN2CP42773 168 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 HTR3AP46098 478 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 IDH2P48735 452 aaKnown RBP13.52□□□□□ -0.25
VTI1A-203ENST00000472892 ANXA11P50995 505 aaKnown RBP13.52□□□□□ -0.25
VTI1A-203ENST00000472892 HPCAP84074 193 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 CAPRIN1Q14444 709 aaKnown RBP13.52□□□□□ -0.25
VTI1A-203ENST00000472892 TIMM23BQ5SRD1 257 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 SSX8Q7RTT4 187 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 ATG4DQ86TL0 474 aaPredicted RBP13.52□□□□□ -0.25
VTI1A-203ENST00000472892 P2RY8Q86VZ1 359 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 ZNF100Q8IYN0 542 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 GLB1L3Q8NCI6 653 aaPredicted RBP13.52□□□□□ -0.25
VTI1A-203ENST00000472892 EMC3Q9P0I2 261 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 TRAPPC4Q9Y296 219 aa13.52□□□□□ -0.25
VTI1A-203ENST00000472892 GOLGA8QA0A0J9YX86 632 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 GOLGA8OA6NCC3 632 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 GOLGA8NF8WBI6 632 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 SLCO1B7G3V0H7 640 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 FAAHO00519 579 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 SMAD7O15105 426 aaKnown RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 CLOCKO15516 846 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 GSNP06396 782 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 RPS4Y1P22090 263 aaKnown RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 NTF4P34130 210 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 MAGEA8P43361 318 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 MAP2K6P52564 334 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 SLC16A1P53985 500 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 ATP5J2P56134 94 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 RPS4XP62701 263 aaKnown RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 LSM11P83369 360 aaKnown RBP eCLIP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 H3F3AP84243 136 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 BSPH1Q075Z2 132 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 PPA1Q15181 289 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 MAPK11Q15759 364 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 COX20Q5RI15 118 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 FBXW9Q5XUX1 488 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 ZNF433Q8N7K0 673 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 SMAP2Q8WU79 429 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 FBXW5Q969U6 566 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 ZHX1-C8orf76Q96EF9 292 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 ZBTB18Q99592 522 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 OR11A1Q9GZK7 315 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 TMEM181Q9P2C4 612 aa13.51□□□□□ -0.25
VTI1A-203ENST00000472892 NSD1Q96L73 2696 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-203ENST00000472892 TMED7-TICAM2A0A0A6YYA0 188 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 AP3D1O14617 1153 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 GPR171O14626 319 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 ZNF208O43345 1280 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 KRT75O95678 551 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 IL6P05231 212 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 SOD3P08294 240 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 GGT1P19440 569 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 SLC1A3P43003 542 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 MVDP53602 400 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 PDCD4Q53EL6 469 aaKnown RBP13.5□□□□□ -0.25
VTI1A-203ENST00000472892 ATG16L1Q676U5 607 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 PIGXQ8TBF5 258 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 NEUROG1Q92886 237 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 MUCL1Q96DR8 90 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms