RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 ELOA3DA6NLF2 546 aaPredicted RBP14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 CPSF4LA6NMK7 179 aaKnown RBP14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 BCKDKO14874 412 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 OR2T1O43869 369 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 HOXD4P09016 255 aaPredicted RBP14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 ZNF708P17019 499 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 FASP25445 335 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 LIMS1P48059 325 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 RNF144AP50876 292 aaPredicted RBP14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 CRYZQ08257 329 aaKnown RBP14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 GTF3C1Q12789 2109 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 MFSD13AQ14CX5 517 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 ELOA3BQ3SY89 546 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 WIPI1Q5MNZ9 446 aaPredicted RBP14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 ELOA3Q8NG57 546 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 LIPHQ8WWY8 451 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 ACOT11Q8WXI4 607 aaPredicted RBP14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 STMN2Q93045 179 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 ZNF524Q96C55 264 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 KLHDC3Q9BQ90 382 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 PSD2Q9BQI7 771 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 FUZQ9BT04 418 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 BDH2Q9BUT1 245 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 PRDM14Q9GZV8 571 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 LDAHQ9H6V9 325 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 CTPS2Q9NRF8 586 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 MAN2C1Q9NTJ4 1040 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 NTNG1Q9Y2I2 539 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 SPTA1P02549 2419 aa14.49□□□□□ -0.09
PCOLCE-205ENST00000472348 KIAA1549Q9HCM3 1950 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 TTLL8A6PVC2 850 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 hCG_2039718K7EN88 272 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 GADD45GO95257 159 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 CST1P01037 141 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 THY1P04216 161 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 BMP7P18075 431 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 PTGER4P35408 488 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 RFC3P40938 356 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 HOXC5Q00444 222 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 NFATC3Q12968 1075 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 ATP6AP1Q15904 470 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 ANKDD1AQ495B1 522 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 SYT14P1Q58G82 188 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 PDSS1Q5T2R2 415 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 TTC33Q6PID6 262 aaPredicted RBP14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 YRDCQ86U90 279 aaKnown RBP14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 TSPYL5Q86VY4 417 aaPredicted RBP14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 CISD2Q8N5K1 135 aaKnown RBP14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 ABTB1Q969K4 478 aaPredicted RBP14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 UCN2Q96RP3 112 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 KLHL4Q9C0H6 718 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 REEP1Q9H902 201 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 S100A14Q9HCY8 104 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 KRCC1Q9NPI7 259 aaPredicted RBP14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 SLC7A7Q9UM01 511 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 ZNF337Q9Y3M9 751 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 V9GYQ6 96 aa14.48□□□□□ -0.09
PCOLCE-205ENST00000472348 BOD1L1Q8NFC6 3051 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 NPIPA5E9PKD4 350 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 CLOCKO15516 846 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 EFNA2O43921 213 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 ENTPD5O75356 428 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 PMS2P2O95744 297 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 CELA3AP09093 270 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 LHX2P50458 406 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 CTBP2P56545 445 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 ELF3P78545 371 aaPredicted RBP14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 C19orf57Q0VDD7 668 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 LILRA2Q8N149 483 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 ST6GALNAC3Q8NDV1 305 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 TMEM239Q8WW34 195 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 TIMP4Q99727 224 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 DEFB127Q9H1M4 99 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 ASF1BQ9NVP2 202 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 NPIPA1Q9UND3 350 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 LYVE1Q9Y5Y7 322 aa14.47□□□□□ -0.09
PCOLCE-205ENST00000472348 SHANK1Q9Y566 2161 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 AHRRA9YTQ3 701 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 H3BNX3 289 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 J3KTA2 159 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 MT-ATP6P00846 226 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 LDLRP01130 860 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 MT-ND1P03886 318 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 GABRA1P14867 456 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 RRM2P31350 389 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 DNAJA1P31689 397 aaKnown RBP14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 IFNGR2P38484 337 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 ARHGDIAP52565 204 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 CLDN18P56856 261 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 RPS3AP61247 264 aaKnown RBP14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 CSNK2A1P68400 391 aaPredicted RBP14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 EGR4Q05215 589 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 RBPJQ06330 500 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 RIPK1Q13546 671 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 ZNF239Q16600 458 aaKnown RBP14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 DCST1Q5T197 706 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 FAM69AQ5T7M9 428 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 Q6ZPB1 254 aaPredicted RBP14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 MBOAT2Q6ZWT7 520 aa14.46□□□□□ -0.09
PCOLCE-205ENST00000472348 GGNQ86UU5 652 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms