RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 DIRAS1O95057 198 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 LDLRP01130 860 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 IFNGR2P38484 337 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 RBM34P42696 430 aaKnown RBP15.23■□□□□ 0.03
CCM2-205ENST00000472223 RPS3AP61247 264 aaKnown RBP15.23■□□□□ 0.03
CCM2-205ENST00000472223 GK3PQ14409 553 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 BCL2A1Q16548 175 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 TMEM44Q2T9K0 475 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 DCST1Q5T197 706 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 WLSQ5T9L3 541 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 ATG4DQ86TL0 474 aaPredicted RBP15.23■□□□□ 0.03
CCM2-205ENST00000472223 ADGRG3Q86Y34 549 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 SIAH3Q8IW03 269 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 PM20D2Q8IYS1 436 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 POC1BQ8TC44 478 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 KLHDC3Q9BQ90 382 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 KLHL4Q9C0H6 718 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 TIGARQ9NQ88 270 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 DNAJB9Q9UBS3 223 aa15.23■□□□□ 0.03
CCM2-205ENST00000472223 A0A1B0GVC2 190 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 A0A1W2PRQ8 180 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 HTR3EA5X5Y0 456 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 BCKDKO14874 412 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 CLOCKO15516 846 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 TIPRLO75663 272 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 NTN1O95631 604 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 EDN3P14138 238 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 BMP7P18075 431 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 MST1P26927 711 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 GTF2E2P29084 291 aaKnown RBP15.22■□□□□ 0.03
CCM2-205ENST00000472223 GFRA1P56159 465 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 DGCR6Q14129 220 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 TMEM176BQ3YBM2 270 aaPredicted RBP15.22■□□□□ 0.03
CCM2-205ENST00000472223 NHSL2Q5HYW2 709 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 GFRALQ6UXV0 394 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 ZNF730Q6ZMV8 503 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 ESPNLQ6ZVH7 1005 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 RNF113BQ8IZP6 322 aaKnown RBP15.22■□□□□ 0.03
CCM2-205ENST00000472223 LINC00471Q8N535 108 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 C10orf53Q8N6V4 93 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 OR52J3Q8NH60 311 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 STK35Q8TDR2 534 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 TMEM43Q9BTV4 400 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 TAPBPLQ9BX59 468 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 SLC19A3Q9BZV2 496 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 S100A14Q9HCY8 104 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 PAQR5Q9NXK6 330 aaPredicted RBP15.22■□□□□ 0.03
CCM2-205ENST00000472223 MED31Q9Y3C7 131 aa15.22■□□□□ 0.03
CCM2-205ENST00000472223 SAMHD1Q9Y3Z3 626 aaKnown RBP15.22■□□□□ 0.03
CCM2-205ENST00000472223 NBEAQ8NFP9 2946 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 A0A1B0GTH9 108 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 TMEM72A0PK05 275 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 SEC14L5O43304 696 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 OR2T1O43869 369 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 AHSA1O95433 338 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 BAG2O95816 211 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 ABOP16442 354 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 SFTPDP35247 375 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 PTGS2P35354 604 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 MLLT10P55197 1068 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 B3GALT5-AS1P59052 145 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 CSNK2A1P68400 391 aaPredicted RBP15.21■□□□□ 0.03
CCM2-205ENST00000472223 FOXK1P85037 733 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 SGCBQ16585 318 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 SYT14P1Q58G82 188 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 ZNF324BQ6AW86 544 aaPredicted RBP15.21■□□□□ 0.03
CCM2-205ENST00000472223 VASNQ6EMK4 673 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 UBQLNLQ8IYU4 475 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 TMEM239Q8WW34 195 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 ACOT11Q8WXI4 607 aaPredicted RBP15.21■□□□□ 0.03
CCM2-205ENST00000472223 SLCO4A1Q96BD0 722 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 SDCCAG3Q96C92 435 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 ZHX1-C8orf76Q96EF9 292 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 KLHL15Q96M94 604 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 ALPK1Q96QP1 1244 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 OR5B2Q96R09 309 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 POTEKPQ9BYX7 375 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 TMEM185BQ9H7F4 350 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 CAMK2AQ9UQM7 478 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 HDGFL3Q9Y3E1 203 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 LIPGQ9Y5X9 500 aa15.21■□□□□ 0.03
CCM2-205ENST00000472223 EPG5Q9HCE0 2579 aa15.21■□□□□ 0.02
CCM2-205ENST00000472223 TLN1Q9Y490 2541 aaKnown RBP15.2■□□□□ 0.02
CCM2-205ENST00000472223 BOD1L1Q8NFC6 3051 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 NPIPA2E9PIF3 369 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 NPIPA3F8WFD2 350 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 H0Y3Z8 333 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 EIF1AYO14602 144 aaKnown RBP15.2■□□□□ 0.02
CCM2-205ENST00000472223 FFAR1O14842 300 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 STARP49675 285 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 CASP6P55212 293 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 NUP107P57740 925 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 ELF3P78545 371 aaPredicted RBP15.2■□□□□ 0.02
CCM2-205ENST00000472223 SRYQ05066 204 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 TAF11Q15544 211 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 TIMP4Q99727 224 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 SLX1AQ9BQ83 275 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 PLSCR2Q9NRY7 297 aa15.2■□□□□ 0.02
CCM2-205ENST00000472223 TRAV36DV7A0A075B6V5 113 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 SULT2B1O00204 365 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms