RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 CCR4P51679 360 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 ALDH18A1P54886 795 aaKnown RBP8.78□□□□□ -1
CDHR3-209ENST00000472116 DAG1Q14118 895 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 PPP1R7Q15435 360 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 PFKFB4Q16877 469 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 TBRG1Q3YBR2 411 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 MSS51Q4VC12 460 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 AVPI1Q5T686 147 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 TMPPEQ6ZT21 453 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 ISCA2Q86U28 154 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 WDFY1Q8IWB7 410 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 BCL6BQ8N143 479 aaPredicted RBP8.78□□□□□ -1
CDHR3-209ENST00000472116 TMCO5AQ8N6Q1 288 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 ZNF527Q8NB42 609 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 SLC16A11Q8NCK7 471 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 RFWD2Q8NHY2 731 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 ST7LQ8TDW4 575 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 GRK7Q8WTQ7 553 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 SELENOMQ8WWX9 145 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 YIPF5Q969M3 257 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 TIMD4Q96H15 378 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 UBXN10Q96LJ8 280 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 ZNF48Q96MX3 618 aaPredicted RBP8.78□□□□□ -1
CDHR3-209ENST00000472116 ATOH8Q96SQ7 321 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 MRI1Q9BV20 369 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 NOL11Q9H8H0 719 aaKnown RBP8.78□□□□□ -1
CDHR3-209ENST00000472116 BRF2Q9HAW0 419 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 MTO1Q9Y2Z2 717 aaKnown RBP8.78□□□□□ -1
CDHR3-209ENST00000472116 RNF114Q9Y508 228 aa8.78□□□□□ -1
CDHR3-209ENST00000472116 SPIN1Q9Y657 262 aaPredicted RBP8.78□□□□□ -1
CDHR3-209ENST00000472116 NOTCH3Q9UM47 2321 aa8.77□□□□□ -1
CDHR3-209ENST00000472116 C5orf63A6NC05 138 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 PIP5K1CO60331 668 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 H6PDO95479 791 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 HSPA4LO95757 839 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SELEP16581 610 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SERPINB4P48594 390 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 EVX1P49640 407 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SLC16A1P53985 500 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 LCN2P80188 198 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 TEKQ02763 1124 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 HGFACQ04756 655 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 FRG1Q14331 258 aaKnown RBP8.77□□□□□ -1.01
CDHR3-209ENST00000472116 TRADDQ15628 312 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 CD226Q15762 336 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 TUSC1Q2TAM9 212 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 MMEL1Q495T6 779 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SAMD5Q5TGI4 173 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 TSPO2Q5TGU0 170 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 STEAP4Q687X5 459 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 CCDC137Q6PK04 289 aaKnown RBP8.77□□□□□ -1.01
CDHR3-209ENST00000472116 LIAT1Q6ZQX7 453 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SZRD1Q7Z422 152 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 OR2L13Q8N349 312 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 POMGNT2Q8NAT1 580 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 GLB1L3Q8NCI6 653 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SLC25A43Q8WUT9 341 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-209ENST00000472116 JADE3Q92613 823 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SGCDQ92629 289 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 CDKL2Q92772 493 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 LRRC39Q96DD0 335 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 ZNF317Q96PQ6 595 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-209ENST00000472116 RBBP8Q99708 897 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 KLHDC3Q9BQ90 382 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 ZNF385DQ9H6B1 395 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 MIEF1Q9NQG6 463 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 GRID1Q9ULK0 1009 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 SNX6Q9UNH7 406 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 CARD8Q9Y2G2 431 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 NOX1Q9Y5S8 564 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 AUP1Q9Y679 476 aa8.77□□□□□ -1.01
CDHR3-209ENST00000472116 A0A096LPK6 155 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 CCDC151A5D8V7 595 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 MYO1GB0I1T2 1018 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 PCDH7O60245 1069 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 DEAF1O75398 565 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-209ENST00000472116 SKAP2O75563 359 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-209ENST00000472116 FOXH1O75593 365 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 NDUFA7O95182 113 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 PSMG1O95456 288 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 IGHV2-5P01817 119 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 IGFBP1P08833 259 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-209ENST00000472116 PRPS2P11908 318 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 ATP6V1C1P21283 382 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 TIA1P31483 386 aaKnown RBP eCLIP8.76□□□□□ -1.01
CDHR3-209ENST00000472116 CBFBQ13951 182 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 TOMM34Q15785 309 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-209ENST00000472116 TIGD2Q4W5G0 525 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 SYT14P1Q58G82 188 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 KRT80Q6KB66 452 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 C11orf87Q6NUJ2 197 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 METTL2BQ6P1Q9 378 aaKnown RBP8.76□□□□□ -1.01
CDHR3-209ENST00000472116 TTC27Q6P3X3 843 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 COX18Q8N8Q8 333 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 CDRT4Q8N9R6 151 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 NOA1Q8NC60 698 aaKnown RBP8.76□□□□□ -1.01
CDHR3-209ENST00000472116 IL17RDQ8NFM7 739 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 CDC26Q8NHZ8 85 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 RAB1CQ92928 201 aa8.76□□□□□ -1.01
CDHR3-209ENST00000472116 ELP4Q96EB1 424 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms