RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 ZNF474Q6S9Z5 364 aaPredicted RBP13.45□□□□□ -0.26
CALD1-215ENST00000472096 FCRLAQ7L513 359 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 TMEM200AQ86VY9 491 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 ZNF440Q8IYI8 595 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 DPP10Q8N608 796 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 TSPEARQ8WU66 669 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 ABHD3Q8WU67 409 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 REXO5Q96IC2 774 aaKnown RBP13.45□□□□□ -0.26
CALD1-215ENST00000472096 OR5B2Q96R09 309 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 CACYBPQ9HB71 228 aaKnown RBP13.45□□□□□ -0.26
CALD1-215ENST00000472096 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 RLIMQ9NVW2 624 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 CHRNA9Q9UGM1 479 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 NDUFAF1Q9Y375 327 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 SPIN1Q9Y657 262 aaPredicted RBP13.45□□□□□ -0.26
CALD1-215ENST00000472096 CREBBPQ92793 2442 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 POLQO75417 2590 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 CFAP73A6NFT4 308 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 C5orf58C9J3I9 102 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 PABPC4LP0CB38 370 aaKnown RBP13.44□□□□□ -0.26
CALD1-215ENST00000472096 GKN3PP0CG01 181 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 UQCRBP14927 111 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 GPX2P18283 190 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 CCKARP32238 428 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 CD79BP40259 229 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 MDH1P40925 334 aaKnown RBP13.44□□□□□ -0.26
CALD1-215ENST00000472096 PCYT1AP49585 367 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 RAC3P60763 192 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 SF3A3Q12874 501 aaKnown RBP eCLIP13.44□□□□□ -0.26
CALD1-215ENST00000472096 RNPS1Q15287 305 aaKnown RBP13.44□□□□□ -0.26
CALD1-215ENST00000472096 RUNDC3AQ59EK9 446 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 NFKBIDQ8NI38 313 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 LINC01560Q8TB33 94 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 SPATA9Q9BWV2 254 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 KLHL13Q9P2N7 655 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 CHST2Q9Y4C5 530 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 ABCA4P78363 2273 aa13.44□□□□□ -0.26
CALD1-215ENST00000472096 TMED7-TICAM2A0A0A6YYA0 188 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 IGHV3-15A0A0B4J1V0 119 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 EVPLLA8MZ36 301 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 SMAD9O15198 467 aaKnown RBP13.43□□□□□ -0.26
CALD1-215ENST00000472096 PGM3O95394 542 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 ETS2P15036 469 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 ENPP1P22413 925 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 SLC1A3P43003 542 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 HTR3AP46098 478 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 DIO1P49895 249 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 POLR2HP52434 150 aaKnown RBP13.43□□□□□ -0.26
CALD1-215ENST00000472096 CDK6Q00534 326 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 FAM27E3Q08E93 113 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 ZSWIM7Q19AV6 140 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 GTF2IRD2BQ6EKJ0 949 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 GTF2IRD2Q86UP8 949 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 LSRQ86X29 649 aaPredicted RBP13.43□□□□□ -0.26
CALD1-215ENST00000472096 ADGRG3Q86Y34 549 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 CLIP4Q8N3C7 705 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 ZNF610Q8N9Z0 462 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 ANKRD27Q96NW4 1050 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 CGREF1Q99674 301 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 TMEM38AQ9H6F2 299 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 MRGBPQ9NV56 204 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 ELOVL5Q9NYP7 299 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 KLHL14Q9P2G3 628 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 OSGIN1Q9UJX0 560 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 IFT52Q9Y366 437 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 TMED7Q9Y3B3 224 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 TESMINQ9Y4I5 508 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 CSMD1Q96PZ7 3565 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 TACC2O95359 2948 aa13.43□□□□□ -0.26
CALD1-215ENST00000472096 AKAP6Q13023 2319 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 HRNRQ86YZ3 2850 aaPredicted RBP13.42□□□□□ -0.26
CALD1-215ENST00000472096 FAM221AA4D161 298 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 SH3D21A4FU49 640 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 A6NNC1 897 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 SULT2B1O00204 365 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 FBP2O00757 339 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 CTAG2O75638 210 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 FESP07332 822 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 TFPIP10646 304 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 EPXP11678 715 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 POU2F1P14859 743 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 KLK2P20151 261 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 TACR3P29371 465 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 ACAA2P42765 397 aaKnown RBP13.42□□□□□ -0.26
CALD1-215ENST00000472096 MTPNP58546 118 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 CSNK2A1P68400 391 aaPredicted RBP13.42□□□□□ -0.26
CALD1-215ENST00000472096 NFYCQ13952 458 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 SCARB2Q14108 478 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 SELPLGQ14242 412 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 DAZAP2Q15038 168 aaPredicted RBP13.42□□□□□ -0.26
CALD1-215ENST00000472096 OCLNQ16625 522 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 ZNF311Q5JNZ3 666 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 REEP3Q6NUK4 255 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 TMPPEQ6ZT21 453 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 ZNF550Q7Z398 422 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 SERPINA11Q86U17 422 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 SLC43A2Q8N370 569 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 C10orf82Q8WW14 230 aa13.42□□□□□ -0.26
CALD1-215ENST00000472096 ARL5BQ96KC2 179 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms