RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 SOX7Q9BT81 388 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 ZSCAN5AQ9BUG6 496 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 CNPPD1Q9BV87 410 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 SSBP3Q9BWW4 388 aaPredicted RBP3.98□□□□□ -1.77
LMNB1-205ENST00000472034 DEFB127Q9H1M4 99 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 MAGEH1Q9H213 219 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 GANQ9H2C0 597 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 SAV1Q9H4B6 383 aaPredicted RBP3.98□□□□□ -1.77
LMNB1-205ENST00000472034 OPA3Q9H6K4 179 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 ZNF556Q9HAH1 456 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 BRF2Q9HAW0 419 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 PDFQ9HBH1 243 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 FAM207AQ9NSI2 230 aaPredicted RBP3.98□□□□□ -1.77
LMNB1-205ENST00000472034 ZNF701Q9NV72 531 aaPredicted RBP3.98□□□□□ -1.77
LMNB1-205ENST00000472034 TMEM248Q9NWD8 314 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 B3GNT2Q9NY97 397 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 MAT2BQ9NZL9 334 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 NAGKQ9UJ70 344 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 ZNF229Q9UJW7 825 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 TMPRSS11EQ9UL52 423 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 ACSL5Q9ULC5 683 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 PLCL2Q9UPR0 1127 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 ALG6Q9Y672 507 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 SLC22A7Q9Y694 548 aa3.98□□□□□ -1.77
LMNB1-205ENST00000472034 NOTCH3Q9UM47 2321 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 IGHV1-45A0A0A0MS14 117 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 A0A1W2PPQ1 181 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 UBE2QL1A1L167 161 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 LINC00862A6NCI5 91 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ARHGAP42A6NI28 874 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 LRRN3E7EW58 273 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CCRL2O00421 344 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 NR5A2O00482 541 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CES2O00748 559 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 FOXS1O43638 330 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CTNSO60931 367 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 MFAP3LO75121 409 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 GLCEO94923 617 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 SERPING1P05155 500 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CDK1P06493 297 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CD63P08962 238 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 THRBP10828 461 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 GYPEP15421 78 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CYP11B1P15538 503 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 SPI1P17947 270 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 TNNI3P19429 210 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 DDCP20711 480 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 IMPDH1P20839 514 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ERP29P30040 261 aaKnown RBP3.97□□□□□ -1.77
LMNB1-205ENST00000472034 PRDX3P30048 256 aaKnown RBP3.97□□□□□ -1.77
LMNB1-205ENST00000472034 PPP2R1BP30154 601 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 RCVRNP35243 200 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ACVR1BP36896 505 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 SERPINF1P36955 418 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 KCNJ3P48549 501 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 COMPP49747 757 aaPredicted RBP3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ASCL1P50553 236 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 MAP2K6P52564 334 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 EMP2P54851 167 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 MAGOHP61326 146 aaKnown RBP3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ZNF91Q05481 1191 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 SLC3A1Q07837 685 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 STX4Q12846 297 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 PRKAA1Q13131 559 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 DUSP8Q13202 625 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 SCGB2A2Q13296 93 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ICAM4Q14773 271 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 HEPACAMQ14CZ8 416 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 PDK1Q15118 436 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ZNHIT3Q15649 155 aaPredicted RBP3.97□□□□□ -1.77
LMNB1-205ENST00000472034 UGT3A2Q3SY77 523 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 TMEM35AQ53FP2 167 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 FAM69AQ5T7M9 428 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 HACD4Q5VWC8 232 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 KCTD11Q693B1 232 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 KRT39Q6A163 491 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 FRMPD2BQ6IN97 320 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ACAD10Q6JQN1 1059 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 FBXO42Q6P3S6 717 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 SHC4Q6S5L8 630 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 FAM111BQ6SJ93 734 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 SEM1Q6ZVN7 128 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ABHD12BQ7Z5M8 362 aaPredicted RBP3.97□□□□□ -1.77
LMNB1-205ENST00000472034 MRPL52Q86TS9 123 aaKnown RBP3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CTAGE3PQ8IX95 158 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 WDTC1Q8N5D0 677 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 POGLUT1Q8NBL1 392 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CCDC197Q8NCU1 140 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 FBXL13Q8NEE6 735 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 OR2L5Q8NG80 312 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 OR4E2Q8NGC2 313 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 BBS10Q8TAM1 723 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 LRRC20Q8TCA0 184 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 Q8TCH9 128 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 ELP5Q8TE02 316 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 CASKIN2Q8WXE0 1202 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.97□□□□□ -1.777e-6■■■■■ 27.5
LMNB1-205ENST00000472034 SPSB4Q96A44 273 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 FKBP10Q96AY3 582 aa3.97□□□□□ -1.77
LMNB1-205ENST00000472034 MTERF3Q96E29 417 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms