RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 LUZP4Q9P127 313 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 SEC14L4Q9UDX3 406 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 SLC9A8Q9Y2E8 581 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 IGSF10Q6WRI0 2623 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 A0A087WZY1 265 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 TMED7-TICAM2A0A0A6YYA0 188 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 A0A0J9YW62 118 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 H0Y3Z8 333 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 SOCS2O14508 198 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ADAMDEC1O15204 470 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 RAMP1O60894 148 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 IGF2P01344 180 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 H1F0P07305 194 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 IGFBP1P08833 259 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 BMP7P18075 431 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 PGCP20142 388 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 EPHA2P29317 976 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 NTF4P34130 210 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 POLR2IP36954 125 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 CASRP41180 1078 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 STARP49675 285 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 CLDN20P56880 219 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 RPP38P78345 283 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 H3F3AP84243 136 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 PRKCDQ05655 676 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 CRYZQ08257 329 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 CBFBQ13951 182 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF239Q16600 458 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ST3GAL2Q16842 350 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 MICAQ29983 383 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF362Q5T0B9 420 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 LPCAT4Q643R3 524 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 C1orf94Q6P1W5 598 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ULK3Q6PHR2 472 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 SHQ1Q6PI26 577 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 TMPRSS11FQ6ZWK6 438 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 MBOAT2Q6ZWT7 520 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 LRRC17Q8N6Y2 441 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 C9orf43Q8TAL5 461 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ACOT11Q8WXI4 607 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 POP5Q969H6 163 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 TAAR8Q969N4 342 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 SNRNP40Q96DI7 357 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 CENPNQ96H22 339 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 RSRC1Q96IZ7 334 aaKnown RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 MOGAT1Q96PD6 335 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF347Q96SE7 839 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 SLX1AQ9BQ83 275 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 TMEM43Q9BTV4 400 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 DCLRE1BQ9H816 532 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 SMURF2Q9HAU4 748 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 SDHAF3Q9NRP4 125 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 ABI3Q9P2A4 366 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 STOML1Q9UBI4 398 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 OAZ3Q9UMX2 235 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 VDAC3Q9Y277 283 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 RPH3AQ9Y2J0 694 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-207ENST00000471342 SLC6A5Q9Y345 797 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 TMED7Q9Y3B3 224 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 U3KQV3 271 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 CFAP46Q8IYW2 2715 aa8.9□□□□□ -0.98
SF3A1-207ENST00000471342 KALRNO60229 2985 aa8.9□□□□□ -0.99
SF3A1-207ENST00000471342 ARRDC5A6NEK1 342 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 H3BNH8 94 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 KLRC4-KLRK1H3BQV0 150 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ERVH48-1M5A8F1 160 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF208O43345 1280 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 MITFO75030 526 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-207ENST00000471342 GADD45GO95257 159 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 OPN1LWP04000 364 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ALPLP05186 524 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ASAH2BP0C7U1 165 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 HPGDP15428 266 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF708P17019 499 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF17P17021 662 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 HK1P19367 917 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 FPR1P21462 350 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 FASP25445 335 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 PEX2P28328 305 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 DNAJA1P31689 397 aaKnown RBP8.89□□□□□ -0.99
SF3A1-207ENST00000471342 RPS4XP62701 263 aaKnown RBP8.89□□□□□ -0.99
SF3A1-207ENST00000471342 EFNB1P98172 346 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 HSF1Q00613 529 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 TRAM2Q15035 370 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ALG10BQ5I7T1 473 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 KDM4DQ6B0I6 523 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 VASNQ6EMK4 673 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 KLHL17Q6TDP4 642 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 CD300LDQ6UXZ3 194 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 SEM1Q6ZVN7 128 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 CCDC71Q8IV32 467 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-207ENST00000471342 CADM2Q8N3J6 435 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 FAM109AQ8N4B1 249 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 TMEM178AQ8NBL3 297 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 OR4K5Q8NGD3 323 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 OR8D4Q8NGM9 314 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 OR52J3Q8NH60 311 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 OR5K1Q8NHB7 308 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 DNAJA4Q8WW22 397 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms