RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 RLN1P04808 185 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 EPORP19235 508 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 C4BPBP20851 252 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 PHBP35232 272 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 ELK3P41970 407 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 GRIA1P42261 906 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 KHKP50053 298 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 CCNHP51946 323 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 NAGLUP54802 743 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 ELAVL3Q14576 367 aaKnown RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 IHHQ14623 411 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 PON2Q15165 354 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 MLF2Q15773 248 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 KCTD19Q17RG1 926 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 LACTB2Q53H82 288 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 ZNF789Q5FWF6 425 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 C9orf64Q5T6V5 341 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 ARMC12Q5T9G4 340 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 FAM46CQ5VWP2 391 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 CASC4Q6P4E1 433 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 C3orf62Q6ZUJ4 267 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 TIPARPQ7Z3E1 657 aaKnown RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 CROCCP2Q86T23 111 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 TMEM135Q86UB9 458 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 UBALD2Q8IYN6 164 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 ZBED8Q8IZ13 594 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 IQCKQ8N0W5 287 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 OR52K1Q8NGK4 314 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 BRSK1Q8TDC3 778 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 OR8D1Q8WZ84 308 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 FAM3CQ92520 227 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 PEX13Q92968 403 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 ECHDC3Q96DC8 303 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 LURAP1Q96LR2 239 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 TRIB3Q96RU7 358 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 RANBP9Q96S59 729 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 INTS14Q96SY0 518 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 RUFY1Q96T51 708 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 C19orf43Q9BQ61 176 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 CCDC77Q9BR77 488 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 FICDQ9BVA6 458 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 KIFC1Q9BW19 673 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 TM6SF2Q9BZW4 377 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 TRABDQ9H4I3 376 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 VIPAS39Q9H9C1 493 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 MRM3Q9HC36 420 aaKnown RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 CHCHD3Q9NX63 227 aaKnown RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 KLK11Q9UBX7 282 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 ZNF107Q9UII5 783 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-202ENST00000471307 MAD1L1Q9Y6D9 718 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 AP1M2Q9Y6Q5 423 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 TRIOO75962 3097 aa4.25□□□□□ -1.73
CCDC39-202ENST00000471307 PRRC2AP48634 2157 aaKnown RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 A0A0J9YYE9 177 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 TSPAN11A1L157 253 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 RIPK2O43353 540 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 TRBC1P01850 177 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 ABHD2P08910 425 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 NUDT17P0C025 328 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 UROSP10746 265 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 PGAM1P18669 254 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 STARD6P59095 220 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 KIAA1024LP59773 190 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 MSLNQ13421 630 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 CASP8Q14790 479 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 TAF1AQ15573 450 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 SPANXN3Q5MJ09 141 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 EOGTQ5NDL2 527 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 STEAP4Q687X5 459 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 ENPP7Q6UWV6 458 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 RABEPKQ7Z6M1 372 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 ABI3BPQ7Z7G0 1075 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 KCNMB4Q86W47 210 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 STK40Q8N2I9 435 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 PRSS35Q8N3Z0 413 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 FBXO36Q8NEA4 188 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 LPCAT1Q8NF37 534 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 OR7G3Q8NG95 312 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 OR6K2Q8NGY2 324 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 RPLP0P6Q8NHW5 317 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 SLC26A7Q8TE54 656 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 PDCD6IPQ8WUM4 868 aaKnown RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 UBLCP1Q8WVY7 318 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 PIH1D2Q8WWB5 315 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 N4BP2L2Q92802 583 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 EXT2Q93063 718 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 C11orf52Q96A22 123 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 RAB7BQ96AH8 199 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 PYCR2Q96C36 320 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 PPP1R16AQ96I34 528 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 C9orf72Q96LT7 481 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 MCCC1Q96RQ3 725 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 LYSMD1Q96S90 227 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 CYTH2Q99418 400 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 GABRG3Q99928 467 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 APOL2Q9BQE5 337 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 TMEM109Q9BVC6 243 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 ROPN1BQ9BZX4 212 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 CDC42EP4Q9H3Q1 356 aaKnown RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 RIMS4Q9H426 269 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms