RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZNF317Q96PQ6 595 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-215ENST00000470338 OR5B2Q96R09 309 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 CGREF1Q99674 301 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 SLC39A3Q9BRY0 314 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-215ENST00000470338 ARMC7Q9H6L4 198 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-215ENST00000470338 OSGIN1Q9UJX0 560 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 A6NNC1 897 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 SULT2B1O00204 365 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 FBP2O00757 339 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF208O43345 1280 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 UQCRBP14927 111 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 TACR3P29371 465 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 CPOXP36551 454 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 DIO1P49895 249 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 CSNK2A1P68400 391 aaPredicted RBP12.61□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF311Q5JNZ3 666 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF550Q7Z398 422 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 NFKBIDQ8NI38 313 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 SLC35B4Q969S0 331 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 ARL5BQ96KC2 179 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 DACH2Q96NX9 599 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 SAR1AQ9NR31 198 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 KLHL14Q9P2G3 628 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 KLHL13Q9P2N7 655 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 ING1Q9UK53 422 aaPredicted RBP12.61□□□□□ -0.39
TOP3B-215ENST00000470338 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 HDGFL3Q9Y3E1 203 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 OTOGQ6ZRI0 2925 aa12.61□□□□□ -0.39
TOP3B-215ENST00000470338 MYO9AB2RTY4 2548 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 SMAD9O15198 467 aaKnown RBP12.6□□□□□ -0.39
TOP3B-215ENST00000470338 CYTIPO60759 359 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 GOSR1O95249 250 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 PMS2P2O95744 297 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 YES1P07947 543 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 TFPIP10646 304 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 PRG2P13727 222 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 POU2F1P14859 743 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 SLC6A2P23975 617 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 ADSLP30566 484 aaPredicted RBP12.6□□□□□ -0.39
TOP3B-215ENST00000470338 PRKAR1BP31321 381 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 UGT2B10P36537 528 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 SF3A3Q12874 501 aaKnown RBP eCLIP12.6□□□□□ -0.39
TOP3B-215ENST00000470338 KLF10Q13118 480 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 SCARB2Q14108 478 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 TMEM201Q5SNT2 666 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 WBP2NLQ6ICG8 309 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 MTDHQ86UE4 582 aaKnown RBP12.6□□□□□ -0.39
TOP3B-215ENST00000470338 TUSC5Q8IXB3 177 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 PSD2Q9BQI7 771 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
TOP3B-215ENST00000470338 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 BCO1Q9HAY6 547 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 CACYBPQ9HB71 228 aaKnown RBP12.6□□□□□ -0.39
TOP3B-215ENST00000470338 RASSF1Q9NS23 344 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 NDRG3Q9UGV2 375 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 TRAPPC4Q9Y296 219 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
TOP3B-215ENST00000470338 AKAP9Q99996 3911 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 IGHV3-15A0A0B4J1V0 119 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 TMEM72A0PK05 275 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 SH3D21A4FU49 640 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 C16orf97H3BN30 126 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 DNPH1O43598 174 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 KLK2P20151 261 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 CCNA2P20248 432 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 CCKARP32238 428 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 KCNJ5P48544 419 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 MTPNP58546 118 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 COPZ1P61923 177 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 RASGEF1BQ0VAM2 473 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 NFYCQ13952 458 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 SELPLGQ14242 412 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 PDK3Q15120 406 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 DHRS4L2Q6PKH6 230 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 BEND4Q6ZU67 534 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 NUFIP2Q7Z417 695 aaKnown RBP12.59□□□□□ -0.39
TOP3B-215ENST00000470338 NET1Q7Z628 596 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-215ENST00000470338 SERPINA11Q86U17 422 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 TMEM200AQ86VY9 491 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 PTOV1Q86YD1 416 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 HIPK4Q8NE63 616 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 C10orf82Q8WW14 230 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 DDIT4LQ96D03 193 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 WFIKKN1Q96NZ8 548 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
TOP3B-215ENST00000470338 SPATA5L1Q9BVQ7 753 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 KAT8Q9H7Z6 458 aaKnown RBP12.59□□□□□ -0.39
TOP3B-215ENST00000470338 TMEM181Q9P2C4 612 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 KLHL9Q9P2J3 617 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 TESMINQ9Y4I5 508 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 PRR14LQ5THK1 2151 aa12.59□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 TPST1O60507 370 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 NPPAP01160 153 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 FESP07332 822 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms