RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-208	ENST00000470171	CXCR1	P25024	350 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	RASGEF1B	Q0VAM2	473 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	MAPK11	Q15759	364 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	ADGRG3	Q86Y34	549 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	ATP6V1C2	Q8NEY4	427 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	LINC01560	Q8TB33	94 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	AURKB	Q96GD4	344 aa	Predicted RBP	13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	QRSL1	Q9H0R6	528 aa	Known RBP	13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	NGB	Q9NPG2	151 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	CTPS2	Q9NRF8	586 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	PARPBP	Q9NWS1	579 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	KLHL28	Q9NXS3	571 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	SLC25A37	Q9NYZ2	338 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	ABCA12	Q86UK0	2595 aa		13.78	□□□□□ -0.2
FDPS-208	ENST00000470171	IGKV3D-15	A0A087WSY6	115 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	BBIP1	A8MTZ0	92 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	NCKAP5	O14513	1909 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	OPN1LW	P04000	364 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	CD1E	P15812	388 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	CRYGS	P22914	178 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	SHC1	P29353	583 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	FBN2	P35556	2912 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	ARFIP2	P53365	341 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	SLC16A1	P53985	500 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	NR1H2	P55055	460 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	CDK6	Q00534	326 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	FAM27E3	Q08E93	113 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	CYLC2	Q14093	348 aa	Predicted RBP	13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	GTDC1	Q4AE62	458 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	RUNDC3A	Q59EK9	446 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	PAGE3	Q5JUK9	113 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	DHRS4L2	Q6PKH6	230 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	GALNT5	Q7Z7M9	940 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	HIPK4	Q8NE63	616 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	ROBO4	Q8WZ75	1007 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	KLHDC3	Q9BQ90	382 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	PSD2	Q9BQI7	771 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	SRXN1	Q9BYN0	137 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	ZNF446	Q9NWS9	450 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	VAPA	Q9P0L0	249 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	OSGIN1	Q9UJX0	560 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	SLC13A4	Q9UKG4	626 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	ANGPT4	Q9Y264	503 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	AP3M1	Q9Y2T2	418 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	TMED7	Q9Y3B3	224 aa		13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-208	ENST00000470171	DCHS2	Q6V1P9	2916 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171		A8MVM7	634 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	VAMP5	O95183	116 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	GPI	P06744	558 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	C8B	P07358	591 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	TACR3	P29371	465 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	ACAA2	P42765	397 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	H3F3A	P84243	136 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	INTS11	Q5TA45	600 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	PLXDC2	Q6UX71	529 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	DLEU7	Q6UYE1	221 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	ZNF836	Q6ZNA1	936 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	DHDDS	Q86SQ9	333 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	SERPINA11	Q86U17	422 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	TUSC5	Q8IXB3	177 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	LSMEM1	Q8N8F7	131 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	C11orf65	Q8NCR3	313 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	STK35	Q8TDR2	534 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	ABHD3	Q8WU67	409 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	RASSF5	Q8WWW0	418 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	ANKRD27	Q96NW4	1050 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	CGREF1	Q99674	301 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	GPATCH1	Q9BRR8	931 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	SF3B5	Q9BWJ5	86 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	TRIM2	Q9C040	744 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	KLHL14	Q9P2G3	628 aa		13.76	□□□□□ -0.21
FDPS-208	ENST00000470171	MYO9A	B2RTY4	2548 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	PKDREJ	Q9NTG1	2253 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	CACNA1C	Q13936	2221 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	TACC2	O95359	2948 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171		A0A1W2PNR3	127 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	CLDN24	A6NM45	220 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	SMAD9	O15198	467 aa	Known RBP	13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	TMCC2	O75069	709 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	PNMT	P11086	282 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	PAX7	P23759	505 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	DNASE1	P24855	282 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	OR3A2	P47893	321 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	RNF144A	P50876	292 aa	Predicted RBP	13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	SCARB2	Q14108	478 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	ABLIM2	Q6H8Q1	611 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	PAQR6	Q6TCH4	344 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	TFAP2E	Q6VUC0	442 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	SPNS3	Q6ZMD2	512 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171		Q6ZT83	130 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	OLIG3	Q7RTU3	272 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	NET1	Q7Z628	596 aa	Predicted RBP	13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	P2RY8	Q86VZ1	359 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	VRK2	Q86Y07	508 aa		13.75	□□□□□ -0.21
FDPS-208	ENST00000470171	CDC20B	Q86Y33	519 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms