RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 OR4F3Q6IEY1 312 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SCARA5Q6ZMJ2 495 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 CTAGE6Q86UF2 777 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SERPINA9Q86WD7 417 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 C9orf40Q8IXQ3 194 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 CLEC4FQ8N1N0 589 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 MFSD9Q8NBP5 474 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 OR51G2Q8NGK0 314 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 IL1F10Q8WWZ1 152 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SLC25A38Q96DW6 304 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 IMMP1LQ96LU5 166 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 TECTBQ96PL2 329 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 MTMR9Q96QG7 549 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 PLIN2Q99541 437 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 CITED1Q99966 193 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SLC39A3Q9BRY0 314 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 TUBGCP2Q9BSJ2 902 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 ROPN1BQ9BZX4 212 aaPredicted RBP2.68□□□□□ -1.98
BRCA2-202ENST00000470094 GLT8D2Q9H1C3 349 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 GLIPR2Q9H4G4 154 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 VPS37BQ9H9H4 285 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 ISG20L2Q9H9L3 353 aaKnown RBP2.68□□□□□ -1.98
BRCA2-202ENST00000470094 MCCC2Q9HCC0 563 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 WRAP73Q9P2S5 460 aaPredicted RBP2.68□□□□□ -1.98
BRCA2-202ENST00000470094 RPS6KB2Q9UBS0 482 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SEC14L3Q9UDX4 400 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 ADAM28Q9UKQ2 775 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SCML2Q9UQR0 700 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 KANK1Q14678 1352 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 FAM231BA6NCW3 169 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 ZNF716A6NP11 495 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 F5H6K3 240 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 SGK1O00141 431 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 WWP2O00308 870 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 RTL8CO15255 209 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 PRKAB2O43741 272 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 CIB2O75838 187 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 IGLV1-47P01700 117 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 IGHV3-23P01764 117 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 IGHG4P01861 327 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 ZNF735P0CB33 412 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 SFTPCP11686 197 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 NCK1P16333 377 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 IMPDH1P20839 514 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 CDH5P33151 784 aaPredicted RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 NF2P35240 595 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 CDH4P55283 916 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 VLDLRP98155 873 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 OC90Q02509 493 aaPredicted RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 KLRC3Q07444 240 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 KYAT1Q16773 422 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 SLC25A52Q3SY17 297 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 TP53I3Q53FA7 332 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 CTSL3PQ5NE16 218 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 FAM199XQ6PEV8 388 aaPredicted RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 TRPM8Q7Z2W7 1104 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 NANOGNBQ7Z5D8 188 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 NECAB1Q8N987 351 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 OR4D9Q8NGE8 314 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 SLC38A2Q96QD8 506 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 OR5B2Q96R09 309 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 CCNL2Q96S94 520 aaPredicted RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 NIPSNAP3BQ9BS92 247 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 SPATA16Q9BXB7 569 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 RHBGQ9H310 441 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 PPDPFQ9H3Y8 114 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 EHD1Q9H4M9 534 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 VCPKMTQ9H867 229 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 SAMD4AQ9UPU9 718 aaKnown RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 L3MBTL1Q9Y468 752 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 RAI1Q7Z5J4 1906 aaPredicted RBP2.67□□□□□ -1.98
BRCA2-202ENST00000470094 USP6P35125 1406 aa2.67□□□□□ -1.98
BRCA2-202ENST00000470094 IGHV2-70DA0A0C4DH43 119 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 GOLGA8OA6NCC3 632 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 GOLGA8NF8WBI6 632 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 FOXE1O00358 373 aaPredicted RBP2.66□□□□□ -1.98
BRCA2-202ENST00000470094 MED7O43513 233 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 ERLIN1O75477 346 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 ALOX5P09917 674 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 SLC2A3P11169 496 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 SERPINA2P20848 420 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 TDO2P48775 406 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 ATP1B3P54709 279 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 PRMT2P55345 433 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 RPL32P62910 135 aaKnown RBP2.66□□□□□ -1.98
BRCA2-202ENST00000470094 BST1Q10588 318 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 CUL1Q13616 776 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 PRR4Q16378 134 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 SSX2Q16385 188 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 UFSP1Q6NVU6 142 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 RUFY3Q7L099 469 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 DHDDSQ86SQ9 333 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 TPRA1Q86W33 373 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 FAM228AQ86W67 206 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 TGIF2LYQ8IUE0 185 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 TGIF2LXQ8IUE1 241 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 CCDC50Q8IVM0 306 aa2.66□□□□□ -1.98
BRCA2-202ENST00000470094 SLC35F2Q8IXU6 374 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms