RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 GPR171O14626 319 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 PMS2P2O95744 297 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 THBS1P07996 1170 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 DHRS4L1P0CG22 281 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 LBPP18428 481 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 RYKP34925 604 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 CHI3L1P36222 383 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-208ENST00000470076 KCNJ10P78508 379 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 FUT5Q11128 374 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 GPAT3Q53EU6 434 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 SPANXN4Q5MJ08 99 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 ARFGAP2Q8N6H7 521 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 PIGXQ8TBF5 258 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 APH1AQ96BI3 265 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 RADILQ96JH8 1075 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 SORT1Q99523 831 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 SLC35A5Q9BS91 424 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 SLCO5A1Q9H2Y9 848 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 NOSIPQ9Y314 301 aaKnown RBP15.44■□□□□ 0.06
COL7A1-208ENST00000470076 GOLGA8QA0A0J9YX86 632 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 GOLGA8OA6NCC3 632 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 KIAA1324LA8MWY0 1029 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-208ENST00000470076 SHISA9B4DS77 424 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 E9PBE3 544 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 GOLGA8NF8WBI6 632 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 ABCD4O14678 606 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 RAMP1O60894 148 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 BCAS1O75363 584 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-208ENST00000470076 S100A3P33764 101 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 HTR3AP46098 478 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 SLC16A1P53985 500 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 KRTAP1-1Q07627 177 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 FAPQ12884 760 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 FAM174BQ3ZCQ3 159 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 DTX2Q86UW9 622 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 UBE2J2Q8N2K1 259 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 ZG16BQ96DA0 208 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 ARL5BQ96KC2 179 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 CCDC115Q96NT0 180 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 TRAF4Q9BUZ4 470 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-208ENST00000470076 REG4Q9BYZ8 158 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 NUF2Q9BZD4 464 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 BARX1Q9HBU1 254 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-208ENST00000470076 NPAP1Q9NZP6 1156 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 BTNL2Q9UIR0 455 aa15.43■□□□□ 0.06
COL7A1-208ENST00000470076 CHD3Q12873 2000 aaKnown RBP15.43■□□□□ 0.06
COL7A1-208ENST00000470076 HMGN4O00479 90 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 IGHV4-39P01824 125 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 ACVR1BP36896 505 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 ANXA11P50995 505 aaKnown RBP15.42■□□□□ 0.06
COL7A1-208ENST00000470076 CDH11P55287 796 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 TXNL4AP83876 142 aaKnown RBP15.42■□□□□ 0.06
COL7A1-208ENST00000470076 CHRNEQ04844 493 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 DMTNQ08495 405 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 OGFOD2Q6N063 350 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 TMEM108Q6UXF1 575 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 ADGRG3Q86Y34 549 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 CMIPQ8IY22 773 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 TRIML2Q8N7C3 387 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 HS6ST2Q96MM7 605 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 TRNT1Q96Q11 434 aaKnown RBP15.42■□□□□ 0.06
COL7A1-208ENST00000470076 MEAF6Q9HAF1 191 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 ASB6Q9NWX5 421 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 MALT1Q9UDY8 824 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 MGAT4BQ9UQ53 548 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 TRAPPC4Q9Y296 219 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 CR1P17927 2039 aa15.42■□□□□ 0.06
COL7A1-208ENST00000470076 CIB4A0PJX0 185 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 PRAMEF27A3QJZ7 478 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 CLDN24A6NM45 220 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 MRPL33O75394 65 aaKnown RBP15.41■□□□□ 0.06
COL7A1-208ENST00000470076 CRLF1O75462 422 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 RAD51DO75771 328 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 CD8AP01732 235 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 IGHV3-9P01782 118 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 BGNP21810 368 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 PTAFRP25105 342 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 MAGEA8P43361 318 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 IDH2P48735 452 aaKnown RBP15.41■□□□□ 0.06
COL7A1-208ENST00000470076 PLAURQ03405 335 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 LRRC74AQ0VAA2 488 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 STX3Q13277 289 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 NRF1Q16656 503 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 AGAP6Q5VW22 663 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 KLHL17Q6TDP4 642 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 DNM1P46Q6ZS02 220 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 RNF130Q86XS8 419 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 CNOT9Q92600 299 aaKnown RBP15.41■□□□□ 0.06
COL7A1-208ENST00000470076 PMM1Q92871 262 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 PANX1Q96RD7 426 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 OR11A1Q9GZK7 315 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 TAS2R16Q9NYV7 291 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 TMEM181Q9P2C4 612 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 ALPK2Q86TB3 2170 aa15.41■□□□□ 0.06
COL7A1-208ENST00000470076 HEATR1Q9H583 2144 aaKnown RBP15.4■□□□□ 0.06
COL7A1-208ENST00000470076 CCDC154A6NI56 674 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 AGAP5A6NIR3 686 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 CCT8L1PA6NM43 557 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 ZNF208O43345 1280 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 EIF1BO60739 113 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms