RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CD163Q86VB7 1156 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 AQP12AQ8IXF9 295 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 FAM156AQ8NDB6 213 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ELOA3Q8NG57 546 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 OR5M1Q8NGP8 315 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 OR6S1Q8NH40 331 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 OR2V1Q8NHB1 315 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 CPNE4Q96A23 557 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 C3orf49Q96BT1 292 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 HS6ST2Q96MM7 605 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC19A3Q9BZV2 496 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 MAGIXQ9H6Y5 334 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 GP6Q9HCN6 339 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 CTPS2Q9NRF8 586 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 GLRX2Q9NS18 164 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC5A6Q9Y289 635 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 FAM32AQ9Y421 112 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 GTF3C1Q12789 2109 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ESPL1Q14674 2120 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ZGRF1Q86YA3 2104 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 A0A087WUJ7 227 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 M0R3H8 397 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 CCL21O00585 134 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ACOT8O14734 319 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 CHP2O43745 196 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 PMS2P2O95744 297 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 CRHP06850 196 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 AGAP20933 346 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 RBM34P42696 430 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 SMSP52788 366 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 SMIM11AP58511 58 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ST3GAL3Q11203 375 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 MFSD13AQ14CX5 517 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ENTPD8Q5MY95 495 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 HBMQ6B0K9 141 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 RPTNQ6XPR3 784 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 LINC00114Q6XXX2 140 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 TMPPEQ6ZT21 453 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ASRGL1Q7L266 308 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 GGNQ86UU5 652 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 COMTD1Q86VU5 262 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 C10orf67Q8IYJ2 551 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC43A2Q8N370 569 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 OR5M9Q8NGP3 310 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ADAMTS16Q8TE57 1224 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF524Q96C55 264 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ZHX1-C8orf76Q96EF9 292 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 HSH2DQ96JZ2 352 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ADGRG7Q96K78 797 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 EPYCQ99645 322 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 KLHDC3Q9BQ90 382 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 TMEM43Q9BTV4 400 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 CADM1Q9BY67 442 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ANKRD19PQ9H560 264 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ALKBH4Q9NXW9 302 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 GMPR2Q9P2T1 348 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 MCTS1Q9ULC4 181 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 ENPP4Q9Y6X5 453 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 HEATR5AQ86XA9 2040 aa11.36□□□□□ -0.59
SPTLC1-204ENST00000469778 HSPB2A8KAH6 182 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 EIF1AYO14602 144 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 FRS3O43559 492 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 TPST2O60704 377 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 PRKD3O94806 890 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 SYNGR4O95473 234 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 IGF2P01344 180 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 IL2RAP01589 272 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 TFPIP10646 304 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 RHCEP18577 417 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 TCEA1P23193 301 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 HTR2AP28223 471 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 AGFG1P52594 562 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 SUCLG1P53597 346 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 CDH12P55289 794 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 CLDN15P56746 228 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 CLDN20P56880 219 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 TAS2R41P59536 307 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC35A1P78382 337 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 HOXC5Q00444 222 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 SRYQ05066 204 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 HSPB2Q16082 182 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 CTU2Q2VPK5 515 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 ACSF3Q4G176 576 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 FAM98BQ52LJ0 330 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 DCST1Q5T197 706 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 PIWIL3Q7Z3Z3 882 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 UBQLNLQ8IYU4 475 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 OR10D3Q8NH80 312 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 VANGL1Q8TAA9 524 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 OSTF1Q92882 214 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 PRRC1Q96M27 445 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 DMRTA2Q96SC8 542 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF347Q96SE7 839 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 TUBA1CQ9BQE3 449 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 TTYH2Q9BSA4 534 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 TACO1Q9BSH4 297 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 FNDC11Q9BVV2 318 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 IL1RAPQ9NPH3 570 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 RIMS3Q9UJD0 308 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms