RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 BDH2Q9BUT1 245 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 GSX2Q9BZM3 304 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 OR11A1Q9GZK7 315 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 EXOSC3Q9NQT5 275 aaKnown RBP19.3■□□□□ 0.68
TTC28-204ENST00000468807 EMC3Q9P0I2 261 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 LAMP3Q9UQV4 416 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 LIPT1Q9Y234 373 aa19.3■□□□□ 0.68
TTC28-204ENST00000468807 ZNF724A8MTY0 619 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 RFXANKO14593 260 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 AP3D1O14617 1153 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 IGHV3-9P01782 118 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 EDNRAP25101 427 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 LRRC74AQ0VAA2 488 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 GNA13Q14344 377 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 COX20Q5RI15 118 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 ATG4DQ86TL0 474 aaPredicted RBP19.29■□□□□ 0.68
TTC28-204ENST00000468807 MTDHQ86UE4 582 aaKnown RBP19.29■□□□□ 0.68
TTC28-204ENST00000468807 LSRQ86X29 649 aaPredicted RBP19.29■□□□□ 0.68
TTC28-204ENST00000468807 WDR60Q8WVS4 1066 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 ZNF75CPQ92670 426 aaPredicted RBP19.29■□□□□ 0.68
TTC28-204ENST00000468807 ARL5BQ96KC2 179 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 SLC38A1Q9H2H9 487 aa19.29■□□□□ 0.68
TTC28-204ENST00000468807 ZANQ9Y493 2812 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 AGAP5A6NIR3 686 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 FAM171A2A8MVW0 826 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 SLCO1B7G3V0H7 640 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 ADAM11O75078 769 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 SLC22A3O75751 556 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 ANP32DO95626 131 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 KRT75O95678 551 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 IDO1P14902 403 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 IL7RP16871 459 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 OR2B6P58173 313 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 PLAURQ03405 335 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 KRTAP21-3Q3LHN1 58 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 NCMAPQ5T1S8 102 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 ABLIM2Q6H8Q1 611 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 LRRC74BQ6ZQY2 392 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 GLB1L3Q8NCI6 653 aaPredicted RBP19.28■□□□□ 0.68
TTC28-204ENST00000468807 COX4I2Q96KJ9 171 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 USB1Q9BQ65 265 aaKnown RBP19.28■□□□□ 0.68
TTC28-204ENST00000468807 MANSC1Q9H8J5 431 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 NOSIPQ9Y314 301 aaKnown RBP19.28■□□□□ 0.68
TTC28-204ENST00000468807 HDGFL3Q9Y3E1 203 aa19.28■□□□□ 0.68
TTC28-204ENST00000468807 PMS2P2O95744 297 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 IL6P05231 212 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 IGHV1-2P23083 117 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 ATP5J2P56134 94 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 RPS4XP62701 263 aaKnown RBP19.27■□□□□ 0.68
TTC28-204ENST00000468807 TXNL4AP83876 142 aaKnown RBP19.27■□□□□ 0.68
TTC28-204ENST00000468807 BSPH1Q075Z2 132 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 PPA1Q15181 289 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 SLC9B1Q4ZJI4 515 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 ADGRG3Q86Y34 549 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 CMIPQ8IY22 773 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 FBXW5Q969U6 566 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 MUCL1Q96DR8 90 aa19.27■□□□□ 0.68
TTC28-204ENST00000468807 TMED7-TICAM2A0A0A6YYA0 188 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 ERLIN1O75477 346 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 CNOT4O95628 575 aaKnown RBP19.26■□□□□ 0.67
TTC28-204ENST00000468807 LY6G6DO95868 133 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 HEXAP06865 529 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 DBIP07108 87 aaKnown RBP19.26■□□□□ 0.67
TTC28-204ENST00000468807 UQCRBP14927 111 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 GGT1P19440 569 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 FKBP2P26885 142 aaKnown RBP19.26■□□□□ 0.67
TTC28-204ENST00000468807 CRATP43155 626 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 HTR3AP46098 478 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 POLR2HP52434 150 aaKnown RBP19.26■□□□□ 0.67
TTC28-204ENST00000468807 PDCD4Q53EL6 469 aaKnown RBP19.26■□□□□ 0.67
TTC28-204ENST00000468807 ADAM5Q6NVV9 412 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 CCDC103Q8IW40 242 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 KBTBD8Q8NFY9 601 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 PIGXQ8TBF5 258 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 IGFBPL1Q8WX77 278 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 NEUROG1Q92886 237 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 APH1AQ96BI3 265 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 DDIT4LQ96D03 193 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 MTHFD2LQ9H903 347 aaPredicted RBP19.26■□□□□ 0.67
TTC28-204ENST00000468807 P2RX2Q9UBL9 471 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 TMED7Q9Y3B3 224 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 TLN2Q9Y4G6 2542 aa19.26■□□□□ 0.67
TTC28-204ENST00000468807 CADP27708 2225 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 RAD51DO75771 328 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 TACR3P29371 465 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 MRPL2Q5T653 305 aaKnown RBP19.25■□□□□ 0.67
TTC28-204ENST00000468807 AP1ARQ63HQ0 302 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 PEX5LQ8IYB4 626 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 LILRB1Q8NHL6 650 aaPredicted RBP19.25■□□□□ 0.67
TTC28-204ENST00000468807 PIWIL2Q8TC59 973 aaKnown RBP19.25■□□□□ 0.67
TTC28-204ENST00000468807 GTPBP3Q969Y2 492 aaKnown RBP19.25■□□□□ 0.67
TTC28-204ENST00000468807 SLC6A13Q9NSD5 602 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 TMEM181Q9P2C4 612 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 OSGIN1Q9UJX0 560 aa19.25■□□□□ 0.67
TTC28-204ENST00000468807 IGKV3D-15A0A087WSY6 115 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 CIB4A0PJX0 185 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 TMEM72A0PK05 275 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 DPRXA6NFQ7 191 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 CFAP73A6NFT4 308 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 CCT8L1PA6NM43 557 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms