RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 FAAHO00519 579 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 DIAPH2O60879 1101 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 SMPD2O60906 423 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 BCAS1O75363 584 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 TGDSO95455 350 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 PMS2P2O95744 297 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 C1QCP02747 245 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 FESP07332 822 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 RPS4Y1P22090 263 aaKnown RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 LOXP28300 417 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 LSP1P33241 339 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 OR3A2P47893 321 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 MAP2K6P52564 334 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 NKX6-1P78426 367 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 PDK3Q15120 406 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 COX20Q5RI15 118 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 SFRP5Q5T4F7 317 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 SHEQ5VZ18 495 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 Q6ZT83 130 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 MTDHQ86UE4 582 aaKnown RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 WFDC8Q8IUA0 241 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 PEX5LQ8IYB4 626 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 ZNF440Q8IYI8 595 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 LRRC75A-AS1Q8N1F1 130 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 PNPT1Q8TCS8 783 aaKnown RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 HSD17B8Q92506 261 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 CNOT9Q92600 299 aaKnown RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 KISS1RQ969F8 398 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 S100PBPQ96BU1 408 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 THOC1Q96FV9 657 aaKnown RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 HS3ST6Q96QI5 342 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 CCL19Q99731 98 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 FAM107BQ9H098 131 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 NPHS2Q9NP85 383 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 NGBQ9NPG2 151 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 P2RX2Q9UBL9 471 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 ING1Q9UK53 422 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-207ENST00000467985 USH1CQ9Y6N9 552 aa16.95■□□□□ 0.3
COL7A1-207ENST00000467985 FAM234BA2RU67 622 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 TMEM247A6NEH6 219 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 CLDN24A6NM45 220 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 CNOT4O95628 575 aaKnown RBP16.94■□□□□ 0.3
COL7A1-207ENST00000467985 IDH2P48735 452 aaKnown RBP16.94■□□□□ 0.3
COL7A1-207ENST00000467985 ITGADQ13349 1161 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 ZSWIM7Q19AV6 140 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 EPGNQ6UW88 154 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 GALNT5Q7Z7M9 940 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 HMGN2P46Q86SG4 172 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 TPT1P8Q9HAU6 139 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 TRAPPC4Q9Y296 219 aa16.94■□□□□ 0.3
COL7A1-207ENST00000467985 IGKV3D-15A0A087WSY6 115 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 CFAP73A6NFT4 308 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 ZNF208O43345 1280 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 ADAP00813 363 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 SLC1A3P43003 542 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 CRATP43155 626 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 POLR2HP52434 150 aaKnown RBP16.93■□□□□ 0.3
COL7A1-207ENST00000467985 CRISP3P54108 245 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 STX1BP61266 288 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 PLAURQ03405 335 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 C6orf10Q5SRN2 563 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 ABLIM2Q6H8Q1 611 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 DNAJC14Q6Y2X3 702 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-207ENST00000467985 ZNF704Q6ZNC4 412 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-207ENST00000467985 SSX8Q7RTT4 187 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 CPLX4Q7Z7G2 160 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 ADGRG3Q86Y34 549 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 P3H2Q8IVL5 708 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 WFDC11Q8NEX6 87 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 PIGXQ8TBF5 258 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 DDIT4LQ96D03 193 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 PLPPR2Q96GM1 343 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 CACYBPQ9HB71 228 aaKnown RBP16.93■□□□□ 0.3
COL7A1-207ENST00000467985 DLL4Q9NR61 685 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 SLC6A13Q9NSD5 602 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 ARID1AO14497 2285 aa16.93■□□□□ 0.3
COL7A1-207ENST00000467985 FREM1Q5H8C1 2179 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 NSD1Q96L73 2696 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-207ENST00000467985 TMED7-TICAM2A0A0A6YYA0 188 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 ZNF814B7Z6K7 855 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 GPR171O14626 319 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 TMCC2O75069 709 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 TFPTP0C1Z6 253 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 MRPL19P49406 292 aaKnown RBP16.92■□□□□ 0.3
COL7A1-207ENST00000467985 MVDP53602 400 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 AQP5P55064 265 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 DSTNP60981 165 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 LIN52Q52LA3 116 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 MRPL2Q5T653 305 aaKnown RBP16.92■□□□□ 0.3
COL7A1-207ENST00000467985 ZNF100Q8IYN0 542 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 ZNF300Q96RE9 604 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-207ENST00000467985 SIKE1Q9BRV8 207 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 TMEM204Q9BSN7 226 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 POTEKPQ9BYX7 375 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 RAD21L1Q9H4I0 556 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 TCF7L2Q9NQB0 619 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 TMEM181Q9P2C4 612 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 DCTN4Q9UJW0 460 aa16.92■□□□□ 0.3
COL7A1-207ENST00000467985 ADAM21Q9UKJ8 722 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms