RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 DLEU7Q6UYE1 221 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 PLEKHM3Q6ZWE6 761 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 GTF2IRD2Q86UP8 949 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 OR5B2Q96R09 309 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 MED18Q9BUE0 208 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 CCDC134Q9H6E4 229 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 A4GALTQ9NPC4 353 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 EXOSC3Q9NQT5 275 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 CTPS2Q9NRF8 586 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 ETV2O00321 342 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 TMCC2O75069 709 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 ADAM11O75078 769 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 CGAP01215 116 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 GKN3PP0CG01 181 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 TFPIP10646 304 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 UGT2B10P36537 528 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 APOBEC1P41238 236 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 CTBP2P56545 445 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 PLAURQ03405 335 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 FAM27E3Q08E93 113 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 NFYCQ13952 458 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 LIN52Q52LA3 116 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 RUNDC3AQ59EK9 446 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF311Q5JNZ3 666 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 GCNT6Q5T4J0 391 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 C3orf33Q6P1S2 294 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF474Q6S9Z5 364 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF836Q6ZNA1 936 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 C20orf204Q6ZNR8 217 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 DHDDSQ86SQ9 333 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 C10orf111Q8N326 155 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 CLIP4Q8N3C7 705 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 NFKBIDQ8NI38 313 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 TSPEARQ8WU66 669 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 DNAJA3Q96EY1 480 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 WFIKKN1Q96NZ8 548 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 SRXN1Q9BYN0 137 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 OR10A4Q9H209 315 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 IKZF5Q9H5V7 419 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 PROCRQ9UNN8 238 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 CORO2BQ9UQ03 480 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF443Q9Y2A4 671 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 IFT52Q9Y366 437 aa12.55□□□□□ -0.4
CCHCR1-211ENST00000467553 TRBV5-3A0A0A0MS03 114 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 CFAP73A6NFT4 308 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 PGM3O95394 542 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 ARAFP10398 606 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 BMP2P12643 396 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 GPX2P18283 190 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 KCNJ5P48544 419 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 CDK6Q00534 326 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 GUSBP1Q15486 140 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 MMEL1Q495T6 779 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 GRINAQ7Z429 371 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 RETREG3Q86VR2 466 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 ADGRG3Q86Y34 549 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF440Q8IYI8 595 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 DPP10Q8N608 796 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF610Q8N9Z0 462 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 WFDC11Q8NEX6 87 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 OR6K3Q8NGY3 331 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 BBS10Q8TAM1 723 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 CPNE4Q96A23 557 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 GMPPAQ96IJ6 420 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 CGREF1Q99674 301 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 CCDC106Q9BWC9 280 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 SPATA9Q9BWV2 254 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 ARMC7Q9H6L4 198 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 COQ10BQ9H8M1 238 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 BCL2L10Q9HD36 194 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 PLSCR4Q9NRQ2 329 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 SPIN1Q9Y657 262 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 ABCA2Q9BZC7 2435 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 DSPPQ9NZW4 1301 aa12.54□□□□□ -0.4
CCHCR1-211ENST00000467553 TMED7-TICAM2A0A0A6YYA0 188 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 IGHV3-15A0A0B4J1V0 119 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 LOC100653049A0A140TA62 436 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 CDHR4A6H8M9 788 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 SMPD2O60906 423 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 KRT34O76011 436 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 PRKD3O94806 890 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 THBS1P07996 1170 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 INHBBP09529 407 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 PABPC4LP0CB38 370 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 UQCRBP14927 111 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 ENPP1P22413 925 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 SLC6A2P23975 617 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 TACR3P29371 465 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 ADSLP30566 484 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 RAC3P60763 192 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 EPS8Q12929 822 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 KLF10Q13118 480 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 SCARB2Q14108 478 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 POU4F3Q15319 338 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms