RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 MAD1L1Q9Y6D9 718 aa2.48□□□□□ -2.01
SMC4-207ENST00000467263 V9GY05 133 aa2.48□□□□□ -2.01
SMC4-207ENST00000467263 ASTN1O14525 1302 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 CLSPNQ9HAW4 1339 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 IGKV6-21A0A0C4DH24 114 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 A6NIZ1 184 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 TCP11X1B4DZS4 312 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 ZNF324O75467 553 aaPredicted RBP2.47□□□□□ -2.01
SMC4-207ENST00000467263 SLC25A27O95847 323 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 LGI1O95970 557 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 FGF9P31371 208 aaPredicted RBP2.47□□□□□ -2.01
SMC4-207ENST00000467263 SUCLG1P53597 346 aaKnown RBP2.47□□□□□ -2.01
SMC4-207ENST00000467263 PLA2G16P53816 162 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 TAS2R19P59542 299 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 RAP1BP61224 184 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 IL1RL1Q01638 556 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 MADCAM1Q13477 382 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 NRF1Q16656 503 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 NSUN5P1Q3KNT7 163 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 KLF17Q5JT82 389 aaPredicted RBP2.47□□□□□ -2.01
SMC4-207ENST00000467263 TSPO2Q5TGU0 170 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 CNSTQ6PJW8 725 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 ACOT1Q86TX2 421 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 LINC01551Q86U37 167 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 RALGPS2Q86X27 583 aaPredicted RBP2.47□□□□□ -2.01
SMC4-207ENST00000467263 MFSD6LQ8IWD5 586 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 ATP6V0D2Q8N8Y2 350 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 OR8H1Q8NGG4 311 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 FANK1Q8TC84 345 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 ST8SIA1Q92185 356 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 SLC17A9Q9BYT1 436 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 C6orf203Q9P0P8 240 aaPredicted RBP2.47□□□□□ -2.01
SMC4-207ENST00000467263 GNG12Q9UBI6 72 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 GPRASP1Q5JY77 1395 aa2.47□□□□□ -2.01
SMC4-207ENST00000467263 ATP10DQ9P241 1426 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 IGLV4-69A0A075B6H9 119 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.46□□□□□ -2.02
SMC4-207ENST00000467263 IGKV1D-8A0A087WSZ0 117 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 GSAPA4D1B5 854 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 PES1O00541 588 aaKnown RBP2.46□□□□□ -2.02
SMC4-207ENST00000467263 RIPK2O43353 540 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 HCRTR1O43613 425 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 OR1F1O43749 312 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 NEBLO76041 1014 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 POLR2EP19388 210 aaKnown RBP2.46□□□□□ -2.02
SMC4-207ENST00000467263 MAGP20916 626 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 HERVK_113P61574 105 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 GGTLC2Q14390 218 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 MXD4Q14582 209 aaPredicted RBP2.46□□□□□ -2.02
SMC4-207ENST00000467263 C1orf100Q5SVJ3 147 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 GPRC6AQ5T6X5 926 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 C6orf89Q6UWU4 347 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 COX15Q7KZN9 410 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 C6orf223Q8N319 242 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 OR51S1Q8NGJ8 323 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 BRSK1Q8TDC3 778 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 ARPC1AQ92747 370 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 C4orf36Q96KX1 117 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 MEAF6Q9HAF1 191 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 PHF11Q9UIL8 331 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 ODF2LQ9ULJ1 636 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 TRAF3IP3Q9Y228 551 aa2.46□□□□□ -2.02
SMC4-207ENST00000467263 A0A087WZY1 265 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 A0A0G2JLM5 398 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 IGHV3-64DA0A0J9YX35 117 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 A0A1B0GUS0 222 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 RS1O15537 224 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 TM7SF2O76062 418 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 WISP3O95389 354 aaPredicted RBP2.45□□□□□ -2.02
SMC4-207ENST00000467263 CHTF8P0CG12 524 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 CALCBP10092 127 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 ANXA13P27216 316 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 AP3M2P53677 418 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 ZNF763Q0D2J5 394 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 PJVKQ0ZLH3 352 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 CCDC57Q2TAC2 916 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 LRRC43Q8N309 656 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 FAM210BQ96KR6 192 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 CCNL2Q96S94 520 aaPredicted RBP2.45□□□□□ -2.02
SMC4-207ENST00000467263 HIST1H4GQ99525 98 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 SLC35A5Q9BS91 424 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 HDHD3Q9BSH5 251 aaPredicted RBP2.45□□□□□ -2.02
SMC4-207ENST00000467263 NAT9Q9BTE0 207 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 SELENOIQ9C0D9 397 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 RWDD1Q9H446 243 aaPredicted RBP2.45□□□□□ -2.02
SMC4-207ENST00000467263 SMYD3Q9H7B4 428 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 AATFQ9NY61 560 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMC4-207ENST00000467263 SIGLEC8Q9NYZ4 499 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 NUFIP1Q9UHK0 495 aaKnown RBP2.45□□□□□ -2.02
SMC4-207ENST00000467263 MFHAS1Q9Y4C4 1052 aa2.45□□□□□ -2.02
SMC4-207ENST00000467263 MAP3K15Q6ZN16 1313 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 IGHV1OR21-1A0A087WYE8 117 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 A0A096LNJ9 63 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 C11orf94C9JXX5 98 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 E9PBE3 544 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 NBR2O15453 112 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 UFL1O94874 794 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 H2BFMP0C1H6 154 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms