RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 EOGTQ5NDL2 527 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 ACOT7LQ6ZUV0 252 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 ARCQ7LC44 396 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 FBXO16Q8IX29 292 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 C14orf178Q8N769 122 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 CATSPER1Q8NEC5 780 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR5D13Q8NGL4 314 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 SCFD1Q8WVM8 642 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 SHC3Q92529 594 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 UBE2E3Q969T4 207 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 NPAS2Q99743 824 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 CNPY3Q9BT09 278 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 RNF126Q9BV68 326 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 NMUR2Q9GZQ4 415 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 POPDC2Q9HBU9 364 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 COPS3Q9UNS2 423 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 MEMO1Q9Y316 297 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 SH3TC1Q8TE82 1336 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 FRMPD3Q5JV73 1810 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 E7ENQ6 273 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 KIF2AO00139 706 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 FCMRO60667 390 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 B4GALT2O60909 372 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 GNA11P29992 359 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 CALCRP30988 508 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 LEPP41159 167 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 PTGDSP41222 190 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 RIPK4P57078 832 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 TNFRSF17Q02223 184 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZNF45Q02386 682 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 KLRB1Q12918 225 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 C9orf129Q5T035 196 aaKnown RBP3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 FHL5Q5TD97 284 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 C11orf71Q6IPW1 123 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 RUFY3Q7L099 469 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 HSD17B13Q7Z5P4 300 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 MFSD9Q8NBP5 474 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR13C2Q8NGS9 318 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR56B4Q8NH76 319 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 ST8SIA1Q92185 356 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 N4BP2L2Q92802 583 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 MAGEB18Q96M61 343 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 NICN1Q9BSH3 213 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 SELENOIQ9C0D9 397 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 SLITRK2Q9H156 845 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 VCPKMTQ9H867 229 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 NHEJ1Q9H9Q4 299 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 SGK2Q9HBY8 427 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 MCCC2Q9HCC0 563 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 PRR34Q9NV39 138 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 ADAM28Q9UKQ2 775 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 HPCAL4Q9UM19 191 aa3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 UBQLN1Q9UMX0 589 aaKnown RBP3.17□□□□□ -1.9
CDC42BPA-211ENST00000466538 A0A1B0GUS0 222 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 TUBAL3A6NHL2 446 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 SNTNA6NMZ2 147 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 H0Y8G0 127 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 K7N7A8 449 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 NBR2O15453 112 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 HCRTR1O43613 425 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 BBOX1O75936 387 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 SNAPINO95295 136 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 IGHV3-48P01763 117 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 AQP1P29972 269 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 EPS15P42566 896 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 MAGEA8P43361 318 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR3A4PP47883 348 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 SULT1E1P49888 294 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 DUSP3P51452 185 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 KRTAP10-6P60371 365 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 EGFEM1PQ0D2K5 195 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 KYAT1Q16773 422 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 KLHL38Q2WGJ6 581 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 KLF17Q5JT82 389 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 UNQ9370/PRO34162Q6UXP9 181 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 UTS2BQ765I0 119 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZNF589Q86UQ0 364 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 CCDC65Q8IXS2 484 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR2L13Q8N349 312 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 CCDC71LQ8N9Z2 235 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 FAM83FQ8NEG4 500 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR10H4Q8NGA5 316 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR2AP1Q8NGE2 309 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR1E3Q8WZA6 343 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 PGLYRP4Q96LB8 373 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 SLC38A2Q96QD8 506 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 NPY6RQ99463 290 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 COPS8Q99627 209 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 GAL3ST1Q99999 423 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 MAGT1Q9H0U3 335 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 REEP4Q9H6H4 257 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 PTGES2Q9H7Z7 377 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZDHHC11Q9H8X9 412 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 HYPKQ9NX55 129 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 PIGLQ9Y2B2 252 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 ASB3Q9Y575 518 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 KIF25-AS1Q9Y6Z4 181 aa3.16□□□□□ -1.9
CDC42BPA-211ENST00000466538 A0A0U1RQS6 177 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 HELTA6NFD8 242 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms