RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RLIMQ9NVW2 624 aa8.74□□□□□ -1.01
RTFDC1-205ENST00000466260 ZNF629Q9UEG4 869 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-205ENST00000466260 LEF1Q9UJU2 399 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-205ENST00000466260 ZNF443Q9Y2A4 671 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-205ENST00000466260 NDUFAF1Q9Y375 327 aa8.74□□□□□ -1.01
RTFDC1-205ENST00000466260 SETXQ7Z333 2677 aaKnown RBP8.74□□□□□ -1.01
RTFDC1-205ENST00000466260 FLNBO75369 2602 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 A0A1W2PNV4 684 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 A0A1W2PP18 115 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 C7orf72A4D263 438 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 AGAP5A6NIR3 686 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 EVPLLA8MZ36 301 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ADAM11O75078 769 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 BAG2O95816 211 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 DBIP07108 87 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 TFPIP10646 304 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 HOXB9P17482 250 aaPredicted RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ELK4P28324 431 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 IDH2P48735 452 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 NUDT2P50583 147 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 MTPNP58546 118 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 TXNL4AP83876 142 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 PLAURQ03405 335 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 TLE4Q04727 773 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 MED21Q13503 144 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 SELPLGQ14242 412 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 GNA13Q14344 377 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 CAPRIN1Q14444 709 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 COQ5Q5HYK3 327 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 LRIF1Q5T3J3 769 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 GCNT6Q5T4J0 391 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 OR2A2Q6IF42 318 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 C3orf33Q6P1S2 294 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ESPNLQ6ZVH7 1005 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 PLEKHM3Q6ZWE6 761 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 TMEM200AQ86VY9 491 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 DMRTC2Q8IXT2 367 aaPredicted RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ZZZ3Q8IYH5 903 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ICA1LQ8NDH6 482 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 SLC26A7Q8TE54 656 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 TMEM234Q8WY98 164 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 OSTF1Q92882 214 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 RNASE6Q93091 150 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 REXO5Q96IC2 774 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ADGRG7Q96K78 797 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 MRGPRX4Q96LA9 322 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 LRGUKQ96M69 825 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ECSITQ9BQ95 431 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 ZNF559Q9BR84 538 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 SFXN3Q9BWM7 321 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 SRXN1Q9BYN0 137 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 OPN3Q9H1Y3 402 aaPredicted RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 IKZF5Q9H5V7 419 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 C12orf49Q9H741 205 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 COQ10BQ9H8M1 238 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 SLC52A3Q9NQ40 469 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 DNAJB12Q9NXW2 375 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 CALML5Q9NZT1 146 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 PACSIN3Q9UKS6 424 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 MCTS1Q9ULC4 181 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 POMPQ9Y244 141 aa8.73□□□□□ -1.01
RTFDC1-205ENST00000466260 A6NHS1 94 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 GJE1A6NN92 205 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 FRS3O43559 492 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 TNFSF13O75888 250 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 TFPTP0C1Z6 253 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 FCGR2AP12318 317 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 NID1P14543 1247 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 KLK2P20151 261 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 RPS4Y1P22090 263 aaKnown RBP8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ADH6P28332 368 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 AQP1P29972 269 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 KCNJ5P48544 419 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 CTBP2P56545 445 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 CARD18P57730 90 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 FADDQ13158 208 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 SCARB2Q14108 478 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ADRM1Q16186 407 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ZNF239Q16600 458 aaKnown RBP8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 EXOC3L2Q2M3D2 409 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 MMEL1Q495T6 779 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ZNF311Q5JNZ3 666 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 SAMD4BQ5PRF9 694 aaKnown RBP8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 BTLAQ7Z6A9 289 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 SNX32Q86XE0 403 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 CADM2Q8N3J6 435 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 FAM71CQ8NEG0 241 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ST8SIA1Q92185 356 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ZFP3Q96NJ6 502 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 TREX2Q9BQ50 279 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 CPPED1Q9BRF8 314 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 SLC39A3Q9BRY0 314 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 OR11A1Q9GZK7 315 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 PIF1Q9H611 641 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 MTHFD2LQ9H903 347 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 RNF122Q9H9V4 155 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms