RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 RPA2P15927 270 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 ANXA13P27216 316 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 CAV2P51636 162 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 HSPA2P54652 639 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 CAPRIN1Q14444 709 aaKnown RBP2.86□□□□□ -1.95
LRCH3-211ENST00000466054 GANABQ14697 944 aaKnown RBP2.86□□□□□ -1.95
LRCH3-211ENST00000466054 TRIM16LQ309B1 348 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 SLC25A52Q3SY17 297 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 C1orf146Q5VVC0 180 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 TTC23Q5W5X9 447 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 C11orf71Q6IPW1 123 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 CES3Q6UWW8 571 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 OR4D9Q8NGE8 314 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 OR1F12Q8NHA8 337 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 TRMT10AQ8TBZ6 339 aaKnown RBP2.86□□□□□ -1.95
LRCH3-211ENST00000466054 RNF138Q8WVD3 245 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 HTR3CQ8WXA8 447 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 TSGA13Q96PP4 275 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 SPATA16Q9BXB7 569 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 SELENOIQ9C0D9 397 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 RMND5AQ9H871 391 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 PALMDQ9NP74 551 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 SLC17A5Q9NRA2 495 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 PIPOXQ9P0Z9 390 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 PCSK1NQ9UHG2 260 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 ISY1Q9ULR0 285 aaKnown RBP2.86□□□□□ -1.95
LRCH3-211ENST00000466054 TTC21BQ7Z4L5 1316 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 MEGF6O75095 1541 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 FRMPD3Q5JV73 1810 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 PSMB11A5LHX3 300 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 TRDCB7Z8K6 153 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 OR10H3O60404 316 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF780AO75290 641 aaPredicted RBP2.85□□□□□ -1.95
LRCH3-211ENST00000466054 RHOBTB1O94844 696 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 COX5AP20674 150 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 IMPDH1P20839 514 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 UQCRC2P22695 453 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 PAX7P23759 505 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 PSMA5P28066 241 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 CD1BP29016 333 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 APOC4P55056 127 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 NUP107P57740 925 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 CSNK1G2P78368 415 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 CKAP4Q07065 602 aaKnown RBP2.85□□□□□ -1.95
LRCH3-211ENST00000466054 TAF7Q15545 349 aaPredicted RBP2.85□□□□□ -1.95
LRCH3-211ENST00000466054 TP53I3Q53FA7 332 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 CASC10Q5T4H9 136 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 TMEM225Q6GV28 225 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 ATP6V0D2Q8N8Y2 350 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 ANKFN1Q8N957 763 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 OR4D5Q8NGN0 318 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 NEIL3Q8TAT5 605 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 UBE2Q2Q8WVN8 375 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 DCUN1D4Q92564 292 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 PELI1Q96FA3 418 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 TGM7Q96PF1 710 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 HIST1H4GQ99525 98 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 EDEM2Q9BV94 578 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 POLR2J2Q9GZM3 115 aaKnown RBP2.85□□□□□ -1.95
LRCH3-211ENST00000466054 POLR2J3Q9H1A7 115 aaKnown RBP2.85□□□□□ -1.95
LRCH3-211ENST00000466054 AATFQ9NY61 560 aaKnown RBP eCLIP2.85□□□□□ -1.95
LRCH3-211ENST00000466054 MRPS33Q9Y291 106 aaKnown RBP2.85□□□□□ -1.95
LRCH3-211ENST00000466054 SH3TC1Q8TE82 1336 aa2.85□□□□□ -1.95
LRCH3-211ENST00000466054 IGHV3OR16-13A0A075B7E8 117 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 A0A0G2JRQ6 117 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 VSTM2BA6NLU5 285 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 USP27XA6NNY8 438 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 F5H6K3 240 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 PANO1I0J062 215 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 K7EQM0 130 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 UGT2B4P06133 528 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 IQCF3P0C7M6 154 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 PNMTP11086 282 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 POLR2EP19388 210 aaKnown RBP2.84□□□□□ -1.95
LRCH3-211ENST00000466054 MMP11P24347 488 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 HTR1EP28566 365 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 PRDX3P30048 256 aaKnown RBP2.84□□□□□ -1.95
LRCH3-211ENST00000466054 RFC4P35249 363 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 RBMXP38159 391 aaKnown RBP2.84□□□□□ -1.95
LRCH3-211ENST00000466054 PTGDSP41222 190 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF133P52736 654 aaPredicted RBP2.84□□□□□ -1.95
LRCH3-211ENST00000466054 KLRC3Q07444 240 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 ARFRP1Q13795 201 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 TPGS2Q68CL5 300 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF530Q6P9A1 599 aaPredicted RBP2.84□□□□□ -1.95
LRCH3-211ENST00000466054 GET4Q7L5D6 327 aaPredicted RBP2.84□□□□□ -1.95
LRCH3-211ENST00000466054 CCDC50Q8IVM0 306 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 SLC38A6Q8IZM9 456 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 NKAPP1Q8N9T2 125 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 DCAF4L2Q8NA75 395 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 GMCL1P1Q8NEA9 526 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 OR51S1Q8NGJ8 323 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 CHCHD10Q8WYQ3 142 aaPredicted RBP2.84□□□□□ -1.95
LRCH3-211ENST00000466054 ST8SIA1Q92185 356 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 RAPGEF5Q92565 580 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 UCN3Q969E3 161 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 SEC22AQ96IW7 307 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF607Q96SK3 696 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 HES7Q9BYE0 225 aa2.84□□□□□ -1.95
LRCH3-211ENST00000466054 POLR1EQ9GZS1 481 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms