RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.34■□□□□ 0.69
LIME1-203ENST00000465591 MSRB3Q8IXL7 192 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 SLC25A43Q8WUT9 341 aaPredicted RBP19.34■□□□□ 0.69
LIME1-203ENST00000465591 TMEM19Q96HH6 336 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 ALPK1Q96QP1 1244 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 CCDC28BQ9BUN5 200 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 SLC25A37Q9NYZ2 338 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 SLAMF8Q9P0V8 285 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 KLHL9Q9P2J3 617 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 CHST2Q9Y4C5 530 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 CADP27708 2225 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 ATP8B1O43520 1251 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 PPP2R2AP63151 447 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 EPS8Q12929 822 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 ABLIM2Q6H8Q1 611 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 BLOC1S3Q6QNY0 202 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 OR52P1PQ8NH57 321 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 DYDC1Q8WWB3 177 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 INTS9Q9NV88 658 aaKnown RBP19.33■□□□□ 0.68
LIME1-203ENST00000465591 PRSS50Q9UI38 385 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 OSGIN1Q9UJX0 560 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 EDARQ9UNE0 448 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 GPR52Q9Y2T5 361 aa19.33■□□□□ 0.68
LIME1-203ENST00000465591 SETD2Q9BYW2 2564 aaPredicted RBP19.33■□□□□ 0.68
LIME1-203ENST00000465591 TMED7-TICAM2A0A0A6YYA0 188 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.32■□□□□ 0.68
LIME1-203ENST00000465591 TMEM72A0PK05 275 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 CDHR4A6H8M9 788 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 RAMP1O60894 148 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 GKN3PP0CG01 181 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 PPP3CBP16298 524 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 TACR3P29371 465 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 STX1BP61266 288 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 RGNQ15493 299 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 PAGE3Q5JUK9 113 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 TGIF2LYQ8IUE0 185 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 PEX5LQ8IYB4 626 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 C10orf111Q8N326 155 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 CLIP4Q8N3C7 705 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 CKAP2Q8WWK9 683 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 PMM1Q92871 262 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 MAL2Q969L2 176 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 S100PBPQ96BU1 408 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 THOC1Q96FV9 657 aaKnown RBP19.32■□□□□ 0.68
LIME1-203ENST00000465591 TMUB1Q9BVT8 246 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 CCDC167Q9P0B6 97 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 TMED7Q9Y3B3 224 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 VPS13CQ709C8 3753 aa19.32■□□□□ 0.68
LIME1-203ENST00000465591 A0A096LPI6 279 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 ZC3H12DA2A288 527 aaKnown RBP19.31■□□□□ 0.68
LIME1-203ENST00000465591 CFAP73A6NFT4 308 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 CLIC1O00299 241 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 NR5A2O00482 541 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 FAAHO00519 579 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 ADAP00813 363 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 ACAA2P42765 397 aaKnown RBP19.31■□□□□ 0.68
LIME1-203ENST00000465591 OR3A2P47893 321 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 CRISP3P54108 245 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 CSNK2A1P68400 391 aaPredicted RBP19.31■□□□□ 0.68
LIME1-203ENST00000465591 HSP90B2PQ58FF3 399 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 MTDHQ86UE4 582 aaKnown RBP19.31■□□□□ 0.68
LIME1-203ENST00000465591 WFDC8Q8IUA0 241 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 SPDL1Q96EA4 605 aa19.31■□□□□ 0.68
LIME1-203ENST00000465591 RSPO3Q9BXY4 272 aaPredicted RBP19.31■□□□□ 0.68
LIME1-203ENST00000465591 ZNF443Q9Y2A4 671 aaPredicted RBP19.31■□□□□ 0.68
LIME1-203ENST00000465591 SPIN1Q9Y657 262 aaPredicted RBP19.31■□□□□ 0.68
LIME1-203ENST00000465591 ZNF716A6NP11 495 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 ZNF724A8MTY0 619 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 PMS2P2O95744 297 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 PLAUP00749 431 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 IMPDH2P12268 514 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 BMP2P12643 396 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 PRG2P13727 222 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 NTF4P34130 210 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 SLC1A3P43003 542 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 POLR2HP52434 150 aaKnown RBP19.3■□□□□ 0.68
LIME1-203ENST00000465591 ADAM8P78325 824 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 GNA13Q14344 377 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 LIN52Q52LA3 116 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 LRIF1Q5T3J3 769 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 SFRP5Q5T4F7 317 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 KRTAP1-3Q8IUG1 177 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 CCDC103Q8IW40 242 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 TACO1Q9BSH4 297 aaKnown RBP19.3■□□□□ 0.68
LIME1-203ENST00000465591 ADAM19Q9H013 955 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 OR10A4Q9H209 315 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 UBTD1Q9HAC8 227 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 CALML5Q9NZT1 146 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 HDGFL3Q9Y3E1 203 aa19.3■□□□□ 0.68
LIME1-203ENST00000465591 IGKV3D-15A0A087WSY6 115 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 HTR3AP46098 478 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 FOXD4Q12950 439 aaPredicted RBP19.29■□□□□ 0.68
LIME1-203ENST00000465591 BEX5Q5H9J7 111 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 ALKBH2Q6NS38 261 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 MAGEB18Q96M61 343 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 IKZF5Q9H5V7 419 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 A4GALTQ9NPC4 353 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 FANCFQ9NPI8 374 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 VAPAQ9P0L0 249 aa19.29■□□□□ 0.68
LIME1-203ENST00000465591 USF3Q68DE3 2245 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms