RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 EDNRAP25101 427 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 CCR4P51679 360 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 RPS26P62854 115 aaKnown RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 CBFBQ13951 182 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 TIGD2Q4W5G0 525 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 ATP6AP1LQ52LC2 224 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 XKR7Q5GH72 579 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 C6orf136Q5SQH8 315 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 PDZK1Q5T2W1 519 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 IL23RQ5VWK5 629 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 TREML4Q6UXN2 200 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 NATD1Q8N6N6 113 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 OR5D16Q8NGK9 328 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 OR5AK3PQ8NH89 298 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 ZNF75CPQ92670 426 aaPredicted RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 ARL8AQ96BM9 186 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 MOAP1Q96BY2 351 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 MUCL1Q96DR8 90 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 OR5B2Q96R09 309 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 ZNF300Q96RE9 604 aaPredicted RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 PRPF18Q99633 342 aaKnown RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 SOX7Q9BT81 388 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 THUMPD3Q9BV44 507 aaKnown RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 MECRQ9BV79 373 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 BHLHE41Q9C0J9 482 aaPredicted RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 LAT2Q9GZY6 243 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 QRSL1Q9H0R6 528 aaKnown RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 PCDHGB1Q9Y5G3 927 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 IGHV4-61A0A0C4DH41 118 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 TLDC2A0PJX2 215 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 ZNF724A8MTY0 619 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 VWC2LB2RUY7 222 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 CYP7B1O75881 506 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 GGT1P19440 569 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 PRPS1L1P21108 318 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 MATN1P21941 496 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 IGHV1-2P23083 117 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 SESN3P58005 492 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 HBA1P69905 142 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 SKP2Q13309 424 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 GPR68Q15743 365 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 ZNF141Q15928 474 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 PGS1Q32NB8 556 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 AWAT1Q58HT5 328 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 TIMM23BQ5SRD1 257 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 C3orf33Q6P1S2 294 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 ZCCHC23Q6ZST2 131 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 OLIG3Q7RTU3 272 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 GALNT5Q7Z7M9 940 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 RIMKLAQ8IXN7 391 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 ZNF100Q8IYN0 542 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 ZNF433Q8N7K0 673 aaPredicted RBP8.55□□□□□ -1.04
USP39-212ENST00000465514 EIF1ADQ8N9N8 165 aaKnown RBP8.55□□□□□ -1.04
USP39-212ENST00000465514 FNDC5Q8NAU1 212 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 OR2W6PQ8NHA6 318 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 FAM216AQ8WUB2 273 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 APOPT1Q96IL0 206 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 DUSP26Q9BV47 211 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 NMUR2Q9GZQ4 415 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 SERHL2Q9H4I8 314 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 SERINC1Q9NRX5 453 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 CBLN4Q9NTU7 201 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 MKS1Q9NXB0 559 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 NPAP1Q9NZP6 1156 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 SLC17A7Q9P2U7 560 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 ZDHHC2Q9UIJ5 367 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 KCNE5Q9UJ90 142 aa8.55□□□□□ -1.04
USP39-212ENST00000465514 CENPVL1A0A0U1RR11 272 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 DUXAA6NLW8 204 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 H7C417 338 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 SULT2B1O00204 365 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 ABCD4O14678 606 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 FCMRO60667 390 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 DNAJA2O60884 412 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 SPAG7O75391 227 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 SKAP2O75563 359 aaPredicted RBP8.54□□□□□ -1.04
USP39-212ENST00000465514 PGM3O95394 542 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 CSTAP01040 98 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 G6PDP11413 515 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 COX5AP20674 150 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 ARRB2P32121 409 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 SOAT1P35610 550 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 NR4A2P43354 598 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 DIO1P49895 249 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 MERTKQ12866 999 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 ARHGAP11BQ3KRB8 267 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 RINLQ6ZS11 566 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 TMPPEQ6ZT21 453 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 C6orf120Q7Z4R8 191 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 P2RY8Q86VZ1 359 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 CLEC4FQ8N1N0 589 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 ST8SIA1Q92185 356 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 PIMREGQ9BSJ6 248 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 ACER3Q9NUN7 267 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 TMEFF2Q9UIK5 374 aaPredicted RBP8.54□□□□□ -1.04
USP39-212ENST00000465514 MKLN1Q9UL63 735 aa8.54□□□□□ -1.04
USP39-212ENST00000465514 GOLGA8QA0A0J9YX86 632 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 GOLGA8OA6NCC3 632 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 OR5H1A6NKK0 313 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 CCT8L1PA6NM43 557 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms