RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 GABRA4P48169 554 aa17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 ATP12AP54707 1039 aa17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 EFHD2Q96C19 240 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 PGLYRP3Q96LB9 341 aa17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 SMAD5Q99717 465 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 ZNF576Q9H609 170 aa17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 Q9N2J8 555 aa17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 NPAP1Q9NZP6 1156 aa17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 IER3IP1Q9Y5U9 82 aa17.17■□□□□ 0.34
TSPAN4-210ENST00000464987 IGHV5-51A0A0C4DH38 117 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 A0A1B0GVC2 190 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 A6NIN4 97 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 PLPP2O43688 288 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 SRPX2O60687 465 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 CSTAP01040 98 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 CLPSP04118 112 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 PROS1P07225 676 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 SLC6A6P31641 620 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 RBM34P42696 430 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 SF3B4Q15427 424 aaKnown RBP eCLIP17.16■□□□□ 0.344e-7■■■■■ 33.9
TSPAN4-210ENST00000464987 ULK3Q6PHR2 472 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 VASH1Q7L8A9 365 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 ZNF595Q8IYB9 648 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 RDH10Q8IZV5 341 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 ZNF321PQ8N8H1 164 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 ZSCAN1Q8NBB4 408 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 ZPLD1Q8TCW7 415 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 LMX1AQ8TE12 382 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 ST6GAL2Q96JF0 529 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 TGM7Q96PF1 710 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 SPRTNQ9H040 489 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 OR10H1Q9Y4A9 318 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 MTCH2Q9Y6C9 303 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 SPAG17Q6Q759 2223 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 PCNX3Q9H6A9 2034 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 IGHV1OR15-9A0A0B4J2B8 117 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 PRAMEF2O60811 474 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 NSA2O95478 260 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 IFNA16P05015 189 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 PYCR1P32322 319 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 IFITM2Q01629 132 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 TP53I3Q53FA7 332 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 DMRTB1Q96MA1 342 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 DEPDC7Q96QD5 511 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 KCNN2Q9H2S1 579 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 RPS6KB2Q9UBS0 482 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 ZNF221Q9UK13 617 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 MRPS33Q9Y291 106 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 N6AMT1Q9Y5N5 214 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 ALPK2Q86TB3 2170 aa17.16■□□□□ 0.34
TSPAN4-210ENST00000464987 FAM25AB3EWG3 89 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 FAM25CB3EWG5 89 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 FAM25GB3EWG6 89 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 GALP22466 123 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 NAA10P41227 235 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 MTNR1BP49286 362 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 NKAIN2Q5VXU1 208 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 ZNF550Q7Z398 422 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 ZNF615Q8N8J6 731 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 FAM98AQ8NCA5 519 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 OR51Q1Q8NH59 317 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 ABHD4Q8TB40 342 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 CLIP3Q96DZ5 547 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 TCTN2Q96GX1 697 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 ZNF486Q96H40 463 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 SLC38A3Q99624 504 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 UNC13CQ8NB66 2214 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 A0A1W2PPK0 400 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 SERINC4A6NH21 518 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 C4orf47A7E2U8 309 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 CHURC1-FNTBB4DL54 471 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 CLDN4O14493 209 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 THBS2P35442 1172 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 FASLGP48023 281 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 FNTBP49356 437 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 FUT7Q11130 342 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 KCNAB1Q14722 419 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 LCN1P1Q5VSP4 162 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 TRIQKQ629K1 86 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 ARHGAP11AQ6P4F7 1023 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 LYPD4Q6UWN0 246 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 CEACAM19Q7Z692 300 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 CAPSLQ8WWF8 208 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 CTRCQ99895 268 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 INPP5EQ9NRR6 644 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 SOHLH2Q9NX45 425 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 SERTAD3Q9UJW9 196 aa17.15■□□□□ 0.34
TSPAN4-210ENST00000464987 A0A0G2JMP0 313 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 A0A0X1KG70 313 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 A0A1W2PRG6 482 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 OIP5O43482 229 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 HLA-DQB1P01920 261 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 KRT8P05787 483 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 MLLT3P42568 568 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 MZT2AQ6P582 158 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 SYT13Q7L8C5 426 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 OR4M2Q8NGB6 313 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 ZNF524Q96C55 264 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 KLHDC3Q9BQ90 382 aa17.14■□□□□ 0.33
TSPAN4-210ENST00000464987 HAO2Q9NYQ3 351 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms