RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 KLHL13Q9P2N7 655 aa11.55□□□□□ -0.56
XRN1-203ENST00000463916 NDRG3Q9UGV2 375 aa11.55□□□□□ -0.56
XRN1-203ENST00000463916 TEP1Q99973 2627 aaKnown RBP11.54□□□□□ -0.56
XRN1-203ENST00000463916 TMED7-TICAM2A0A0A6YYA0 188 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 ZC3H12DA2A288 527 aaKnown RBP11.54□□□□□ -0.56
XRN1-203ENST00000463916 ENO4A6NNW6 628 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 ZNF814B7Z6K7 855 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 C16orf97H3BN30 126 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 SULT2B1O00204 365 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 FAAHO00519 579 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 HRGP04196 525 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 PABPC4LP0CB38 370 aaKnown RBP11.54□□□□□ -0.56
XRN1-203ENST00000463916 TFPIP10646 304 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 EDNRAP25101 427 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 SLC1A3P43003 542 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 IRX1P78414 480 aaPredicted RBP11.54□□□□□ -0.56
XRN1-203ENST00000463916 LIN52Q52LA3 116 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 COMTD1Q86VU5 262 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 NFKBIDQ8NI38 313 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 ADAM19Q9H013 955 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 C6orf203Q9P0P8 240 aaPredicted RBP11.54□□□□□ -0.56
XRN1-203ENST00000463916 TRIM33Q9UPN9 1127 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 TMED7Q9Y3B3 224 aa11.54□□□□□ -0.56
XRN1-203ENST00000463916 ZNF469Q96JG9 3925 aaPredicted RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 TMEM72A0PK05 275 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 FRS3O43559 492 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 CYTIPO60759 359 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 FESP07332 822 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 YES1P07947 543 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 THBS1P07996 1170 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 ARAFP10398 606 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 GPX2P18283 190 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 HOXC5Q00444 222 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 SELPLGQ14242 412 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 RUNDC3AQ59EK9 446 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 RNF220Q5VTB9 566 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 SERPINA11Q86U17 422 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 SLC25A43Q8WUT9 341 aaPredicted RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 ZNF300Q96RE9 604 aaPredicted RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 CPPED1Q9BRF8 314 aaPredicted RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 SIKE1Q9BRV8 207 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 RAD21L1Q9H4I0 556 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 BCO1Q9HAY6 547 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 NDUFAF1Q9Y375 327 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 PRR14LQ5THK1 2151 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 TMEM247A6NEH6 219 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 RAMP1O60894 148 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 POLR2HP52434 150 aaKnown RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 RASGEF1BQ0VAM2 473 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 LARS2Q15031 903 aaKnown RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 TESK1Q15569 626 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 ZNF311Q5JNZ3 666 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 TMEM201Q5SNT2 666 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 GCNT6Q5T4J0 391 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 METTL21CQ5VZV1 264 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 TFAP2EQ6VUC0 442 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 SLC43A2Q8N370 569 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 DPP10Q8N608 796 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 ZC3HAV1LQ96H79 300 aaKnown RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 MED18Q9BUE0 208 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 SPATA9Q9BWV2 254 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 PLEKHF2Q9H8W4 249 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 LEF1Q9UJU2 399 aaPredicted RBP11.53□□□□□ -0.56
XRN1-203ENST00000463916 ZNF232Q9UNY5 417 aa11.53□□□□□ -0.56
XRN1-203ENST00000463916 UQCRHLA0A096LP55 91 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 DEFB108AA8MXU0 73 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 TPST1O60507 370 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 THBDP07204 575 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 IMPDH2P12268 514 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 NTF4P34130 210 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 HTR3AP46098 478 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 CDK6Q00534 326 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 TSC22D1Q15714 1073 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 PRAMEF8Q5VWM4 474 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 PRAMEF7Q5VXH5 474 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.52□□□□□ -0.57
XRN1-203ENST00000463916 MTDHQ86UE4 582 aaKnown RBP11.52□□□□□ -0.57
XRN1-203ENST00000463916 CCDC103Q8IW40 242 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 GABRG1Q8N1C3 465 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 CADM2Q8N3J6 435 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 GP6Q9HCN6 339 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 KLHL9Q9P2J3 617 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 IFT52Q9Y366 437 aa11.52□□□□□ -0.57
XRN1-203ENST00000463916 SPIN1Q9Y657 262 aaPredicted RBP11.52□□□□□ -0.57
XRN1-203ENST00000463916 C5orf58C9J3I9 102 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 FBP2O00757 339 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 CASKO14936 926 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 GCM2O75603 506 aaPredicted RBP11.51□□□□□ -0.57
XRN1-203ENST00000463916 PMS2P2O95744 297 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
XRN1-203ENST00000463916 PPIBP23284 216 aaKnown RBP11.51□□□□□ -0.57
XRN1-203ENST00000463916 IST1P53990 364 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 MTPNP58546 118 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 CSNK2A1P68400 391 aaPredicted RBP11.51□□□□□ -0.57
XRN1-203ENST00000463916 H3F3AP84243 136 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 BNIP2Q12982 314 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 GLIPR1L2Q4G1C9 344 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 FBXW10Q5XX13 1052 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 BEND4Q6ZU67 534 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms