RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-204	ENST00000463685	OR9Q2	Q8NGE9	314 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	PFN4	Q8NHR9	129 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	SLC38A4	Q969I6	547 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	PNPLA2	Q96AD5	504 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	ZBTB8A	Q96BR9	441 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	MRGPRX4	Q96LA9	322 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	EPYC	Q99645	322 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	BDH2	Q9BUT1	245 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	OR11A1	Q9GZK7	315 aa		13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.55	□□□□□ -0.24
ABCF3-204	ENST00000463685	SH3PXD2B	A1X283	911 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	ZC3H12D	A2A288	527 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	PDLIM1	O00151	329 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	ACOT7	O00154	380 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	HPN	P05981	417 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	THRB	P10828	461 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	PNMT	P11086	282 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	ZNF23	P17027	643 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	ZNF24	P17028	368 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	FPR1	P21462	350 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	PRKACG	P22612	351 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	DNAJA1	P31689	397 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	HTR3A	P46098	478 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	HMGA2	P52926	109 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	SLC34A1	Q06495	639 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	CMPK2	Q5EBM0	449 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	DCST1	Q5T197	706 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	C1QL3	Q5VWW1	255 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	LPCAT4	Q643R3	524 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	LINC00114	Q6XXX2	140 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	EPHX4	Q8IUS5	362 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	FAM109A	Q8N4B1	249 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	OR5K1	Q8NHB7	308 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	TMEM239	Q8WW34	195 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	SMPDL3B	Q92485	455 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	SFXN2	Q96NB2	322 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	PDP1	Q9P0J1	537 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	TMCC3	Q9ULS5	477 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	OAZ3	Q9UMX2	235 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	ZNF337	Q9Y3M9	751 aa		13.54	□□□□□ -0.24
ABCF3-204	ENST00000463685	TLN1	Q9Y490	2541 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	C7orf72	A4D263	438 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685		H3BML4	177 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	ZNHIT1	O43257	154 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	CCNB2	O95067	398 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	SFTPD	P35247	375 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	APOBEC1	P41238	236 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	EIF1	P41567	113 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	STAR	P49675	285 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	ALDH6A1	Q02252	535 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	SLC10A1	Q14973	349 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	TRIP10	Q15642	601 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	LRRC36	Q1X8D7	754 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	MICA	Q29983	383 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	SWT1	Q5T5J6	900 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	SHQ1	Q6PI26	577 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	TTC33	Q6PID6	262 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	TRIL	Q7L0X0	811 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	PRICKLE2	Q7Z3G6	844 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	STK32C	Q86UX6	486 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	CISD2	Q8N5K1	135 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	TEX19	Q8NA77	164 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	OR4K5	Q8NGD3	323 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	MPP4	Q96JB8	637 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	CIB1	Q99828	191 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	PIGQ	Q9BRB3	760 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	SLC25A18	Q9H1K4	315 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	ANKRD19P	Q9H560	264 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	ZDHHC11	Q9H8X9	412 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	MEPE	Q9NQ76	525 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	STOML1	Q9UBI4	398 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	TNFRSF10D	Q9UBN6	386 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	CHRNA9	Q9UGM1	479 aa		13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-204	ENST00000463685	ATRX	P46100	2492 aa		13.52	□□□□□ -0.24
ABCF3-204	ENST00000463685	LRRN3	E7EW58	273 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	NPIPA5	E9PKD4	350 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685		G3V2T6	193 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	ERVH48-1	M5A8F1	160 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	OR10H3	O60404	316 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	TFPI	P10646	304 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	ZNF17	P17021	662 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	PEX2	P28328	305 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	EGR4	Q05215	589 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	C19orf57	Q0VDD7	668 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	GLYR1	Q49A26	553 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	PRR30	Q53SZ7	412 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	RPUSD3	Q6P087	351 aa	Known RBP	13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	MBOAT2	Q6ZWT7	520 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	SIAH3	Q8IW03	269 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	NRM	Q8IXM6	262 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	OR10G2	Q8NGC3	310 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	GIPC3	Q8TF64	312 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	NRG4	Q8WWG1	115 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	KTI12	Q96EK9	354 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	ZNF426	Q9BUY5	554 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	LDAH	Q9H6V9	325 aa		13.52	□□□□□ -0.25
ABCF3-204	ENST00000463685	EXO5	Q9H790	373 aa		13.52	□□□□□ -0.25

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