RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 NEUROG1Q92886 237 aa20.62■□□□□ 0.89
SSNA1-203ENST00000463511 CDS1Q92903 461 aa20.62■□□□□ 0.89
SSNA1-203ENST00000463511 REXO5Q96IC2 774 aaKnown RBP20.62■□□□□ 0.89
SSNA1-203ENST00000463511 SRXN1Q9BYN0 137 aa20.62■□□□□ 0.89
SSNA1-203ENST00000463511 OR51I1Q9H343 314 aa20.62■□□□□ 0.89
SSNA1-203ENST00000463511 DUSP22Q9NRW4 184 aa20.62■□□□□ 0.89
SSNA1-203ENST00000463511 SLC25A37Q9NYZ2 338 aa20.62■□□□□ 0.89
SSNA1-203ENST00000463511 TRBV5-3A0A0A0MS03 114 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 OVOL3O00110 214 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 ANGPT2O15123 496 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 CD3EP07766 207 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 LINGO3P0C6S8 592 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 PABPC4LP0CB38 370 aaKnown RBP20.61■□□□□ 0.89
SSNA1-203ENST00000463511 IL32P24001 234 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 CDKN1AP38936 164 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 TAB1Q15750 504 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 NCMAPQ5T1S8 102 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 DLEU7Q6UYE1 221 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 RNF130Q86XS8 419 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 TREML1Q86YW5 311 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 TUSC5Q8IXB3 177 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 GTPBP3Q969Y2 492 aaKnown RBP20.61■□□□□ 0.89
SSNA1-203ENST00000463511 TRMT61AQ96FX7 289 aaKnown RBP20.61■□□□□ 0.89
SSNA1-203ENST00000463511 AURKBQ96GD4 344 aaPredicted RBP20.61■□□□□ 0.89
SSNA1-203ENST00000463511 BTBD2Q9BX70 525 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 HDHD5Q9BXW7 423 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 TPT1P8Q9HAU6 139 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 KLHL13Q9P2N7 655 aa20.61■□□□□ 0.89
SSNA1-203ENST00000463511 MAGED1Q9Y5V3 778 aaPredicted RBP20.61■□□□□ 0.89
SSNA1-203ENST00000463511 LOC100653049A0A140TA62 436 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 KRT34O76011 436 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 KRT75O95678 551 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 DANCRP0C864 163 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 RNF144AP50876 292 aaPredicted RBP20.6■□□□□ 0.89
SSNA1-203ENST00000463511 MVDP53602 400 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 POU6F2P78424 691 aaPredicted RBP20.6■□□□□ 0.89
SSNA1-203ENST00000463511 ZNF117Q03924 483 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 RNPS1Q15287 305 aaKnown RBP20.6■□□□□ 0.89
SSNA1-203ENST00000463511 MAPRE2Q15555 327 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 ETFDHQ16134 617 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 SFRP5Q5T4F7 317 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 HEPHL1Q6MZM0 1159 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 SNX32Q86XE0 403 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 ANKS4BQ8N8V4 417 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 PNPT1Q8TCS8 783 aaKnown RBP20.6■□□□□ 0.89
SSNA1-203ENST00000463511 CPNE4Q96A23 557 aaPredicted RBP20.6■□□□□ 0.89
SSNA1-203ENST00000463511 REG4Q9BYZ8 158 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 ESRP2Q9H6T0 727 aaKnown RBP20.6■□□□□ 0.89
SSNA1-203ENST00000463511 VAPAQ9P0L0 249 aa20.6■□□□□ 0.89
SSNA1-203ENST00000463511 A0A1W2PQD3 144 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 OR12D1P0DN82 309 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 ELK4P28324 431 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 LCN1P31025 176 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 ACVR1BP36896 505 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 EIF1P41567 113 aaKnown RBP20.59■□□□□ 0.89
SSNA1-203ENST00000463511 CYLC2Q14093 348 aaPredicted RBP20.59■□□□□ 0.89
SSNA1-203ENST00000463511 COX20Q5RI15 118 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 GKAP1Q5VSY0 366 aaPredicted RBP20.59■□□□□ 0.89
SSNA1-203ENST00000463511 TNFAIP8L2Q6P589 184 aaPredicted RBP20.59■□□□□ 0.89
SSNA1-203ENST00000463511 KBTBD8Q8NFY9 601 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 PHOSPHO1Q8TCT1 267 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 SMAP2Q8WU79 429 aaPredicted RBP20.59■□□□□ 0.89
SSNA1-203ENST00000463511 RAB8BQ92930 207 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 NGBQ9NPG2 151 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 TIGARQ9NQ88 270 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 LIPT1Q9Y234 373 aa20.59■□□□□ 0.89
SSNA1-203ENST00000463511 DUXAA6NLW8 204 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 CLIC1O00299 241 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 OIP5O43482 229 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 EFNA2O43921 213 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 NUDT14O95848 222 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 ADAP00813 363 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 IDUAP35475 653 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 KHKP50053 298 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 BSPH1Q075Z2 132 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 FAPQ12884 760 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 ZNF672Q499Z4 452 aaPredicted RBP20.58■□□□□ 0.89
SSNA1-203ENST00000463511 FCRLAQ7L513 359 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 POU5F2Q8N7G0 328 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 RP9Q8TA86 221 aaKnown RBP20.58■□□□□ 0.89
SSNA1-203ENST00000463511 HSD17B8Q92506 261 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 KISS1RQ969F8 398 aaPredicted RBP20.58■□□□□ 0.89
SSNA1-203ENST00000463511 SLCO5A1Q9H2Y9 848 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 GMEB1Q9Y692 573 aa20.58■□□□□ 0.89
SSNA1-203ENST00000463511 NPIPA5A0A0B4J1W7 369 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 BBIP1A8MTZ0 92 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 NPIPA7E9PJI5 369 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 HMGN4O00479 90 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 TP53P04637 393 aaPredicted RBP20.57■□□□□ 0.88
SSNA1-203ENST00000463511 NPIPA8P0DM63 369 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 COX4I1P13073 169 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 ADH6P28332 368 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 NFYCQ13952 458 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 RUNDC3AQ59EK9 446 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 COQ5Q5HYK3 327 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSNA1-203ENST00000463511 REP15Q6BDI9 236 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 CBLN3Q6UW01 205 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 SEZ6L2Q6UXD5 910 aa20.57■□□□□ 0.88
SSNA1-203ENST00000463511 DHDDSQ86SQ9 333 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms