RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ZNF433Q8N7K0 673 aaPredicted RBP17.46■□□□□ 0.39
VARS-221ENST00000463184 NANOS1Q8WY41 292 aaKnown RBP17.46■□□□□ 0.39
VARS-221ENST00000463184 ST8SIA1Q92185 356 aa17.46■□□□□ 0.39
VARS-221ENST00000463184 COQ8BQ96D53 544 aa17.46■□□□□ 0.39
VARS-221ENST00000463184 MAELQ96JY0 434 aaKnown RBP17.46■□□□□ 0.39
VARS-221ENST00000463184 OR7D2Q96RA2 312 aa17.46■□□□□ 0.39
VARS-221ENST00000463184 SDF2Q99470 211 aa17.46■□□□□ 0.39
VARS-221ENST00000463184 THUMPD3Q9BV44 507 aaKnown RBP17.46■□□□□ 0.39
VARS-221ENST00000463184 NMUR2Q9GZQ4 415 aa17.46■□□□□ 0.39
VARS-221ENST00000463184 NOP53Q9NZM5 478 aaKnown RBP17.46■□□□□ 0.39
VARS-221ENST00000463184 NPAP1Q9NZP6 1156 aa17.46■□□□□ 0.39
VARS-221ENST00000463184 ALPK2Q86TB3 2170 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 NUP214P35658 2090 aaPredicted RBP17.45■□□□□ 0.38
VARS-221ENST00000463184 IGHV4-30-2A0A087WSY4 118 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 SERINC4A6NH21 518 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 GPRIN2O60269 458 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 EDF1O60869 148 aaKnown RBP17.45■□□□□ 0.38
VARS-221ENST00000463184 H6PDO95479 791 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 EPHA3P29320 983 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 TTKP33981 857 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 MDH1P40925 334 aaKnown RBP17.45■□□□□ 0.38
VARS-221ENST00000463184 DIO1P49895 249 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 CSNK2A1P68400 391 aaPredicted RBP17.45■□□□□ 0.38
VARS-221ENST00000463184 GUCY1A3Q02108 690 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 PDK3Q15120 406 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 PDZK1Q5T2W1 519 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 FBXW9Q5XUX1 488 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 OGFOD2Q6N063 350 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 TMEM108Q6UXF1 575 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 MAVSQ7Z434 540 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
VARS-221ENST00000463184 TMEM234Q8WY98 164 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 DHRS9Q9BPW9 319 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 CACNG6Q9BXT2 260 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 WDR55Q9H6Y2 383 aaPredicted RBP17.45■□□□□ 0.38
VARS-221ENST00000463184 CBLN4Q9NTU7 201 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 EMC3Q9P0I2 261 aa17.45■□□□□ 0.38
VARS-221ENST00000463184 A0A096LNT2 108 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 DUXAA6NLW8 204 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 SULT2B1O00204 365 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 AK1P00568 194 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 FAM157CP0CG43 387 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 PTNP21246 168 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 PTAFRP25105 342 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 SESN3P58005 492 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 IRX1P78414 480 aaPredicted RBP17.44■□□□□ 0.38
VARS-221ENST00000463184 SKP2Q13309 424 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 PTGR1Q14914 329 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 ZNF141Q15928 474 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 SLC9B1Q4ZJI4 515 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 C6orf52Q5T4I8 152 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 C11orf71Q6IPW1 123 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 KLHL17Q6TDP4 642 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 CLEC2AQ6UVW9 174 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 EPGNQ6UW88 154 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.44■□□□□ 0.38
VARS-221ENST00000463184 SPATA19Q7Z5L4 167 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 MTDHQ86UE4 582 aaKnown RBP17.44■□□□□ 0.38
VARS-221ENST00000463184 OR5D16Q8NGK9 328 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 SLC25A43Q8WUT9 341 aaPredicted RBP17.44■□□□□ 0.38
VARS-221ENST00000463184 TNFRSF13CQ96RJ3 184 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 BHLHE41Q9C0J9 482 aaPredicted RBP17.44■□□□□ 0.38
VARS-221ENST00000463184 QRSL1Q9H0R6 528 aaKnown RBP17.44■□□□□ 0.38
VARS-221ENST00000463184 CCDC134Q9H6E4 229 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 CDC42EP3Q9UKI2 254 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 POU2F3Q9UKI9 436 aa17.44■□□□□ 0.38
VARS-221ENST00000463184 IGKV3D-15A0A087WSY6 115 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 FAM234BA2RU67 622 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 ELOA3DA6NLF2 546 aaPredicted RBP17.43■□□□□ 0.38
VARS-221ENST00000463184 E7EQL1 145 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 CFLARO15519 480 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 CYP7B1O75881 506 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 G6PDP11413 515 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 PGCP20142 388 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 PRPS1L1P21108 318 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 LOXL1Q08397 574 aaPredicted RBP17.43■□□□□ 0.38
VARS-221ENST00000463184 RAB35Q15286 201 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 GPR68Q15743 365 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 TMEM249Q2WGJ8 235 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 ELOA3BQ3SY89 546 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 SYT14P1Q58G82 188 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 NXNQ6DKJ4 435 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 SLC22A25Q6T423 547 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 FBXL14Q8N1E6 418 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 UBE2J2Q8N2K1 259 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 ELOA3Q8NG57 546 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 TMEM160Q9NX00 188 aa17.43■□□□□ 0.38
VARS-221ENST00000463184 CIB4A0PJX0 185 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 STX11O75558 287 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 RAD51DO75771 328 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 CSTAP01040 98 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 SLC25A16P16260 332 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 MATN1P21941 496 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 CLDN8P56748 225 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 HBA1P69905 142 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 VLDLRP98155 873 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 MERTKQ12866 999 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 ABLIM2Q6H8Q1 611 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 DEPDC4Q8N2C3 294 aa17.42■□□□□ 0.38
VARS-221ENST00000463184 MUC15Q8N387 334 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms