RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 MSRB3Q8IXL7 192 aa16■□□□□ 0.15
LINC00960-201ENST00000463183 SLC43A2Q8N370 569 aa16■□□□□ 0.15
LINC00960-201ENST00000463183 PSD2Q9BQI7 771 aa16■□□□□ 0.15
LINC00960-201ENST00000463183 A0A1W2PPR1 153 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 TMEM72A0PK05 275 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 SIAH2O43255 324 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 FRS3O43559 492 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 EDF1O60869 148 aaKnown RBP15.99■□□□□ 0.15
LINC00960-201ENST00000463183 MAGEA8P43361 318 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 MRPL19P49406 292 aaKnown RBP15.99■□□□□ 0.15
LINC00960-201ENST00000463183 POLR2HP52434 150 aaKnown RBP15.99■□□□□ 0.15
LINC00960-201ENST00000463183 ZNF311Q5JNZ3 666 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 GCNT6Q5T4J0 391 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 PAMR1Q6UXH9 720 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 TFAP2EQ6VUC0 442 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 STAC2Q6ZMT1 411 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 CXorf67Q86X51 503 aaPredicted RBP15.99■□□□□ 0.15
LINC00960-201ENST00000463183 CLIP4Q8N3C7 705 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 NFKBIDQ8NI38 313 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 ZHX1-C8orf76Q96EF9 292 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 ACTR6Q9GZN1 396 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 THUMPD1Q9NXG2 353 aaKnown RBP15.99■□□□□ 0.15
LINC00960-201ENST00000463183 OSGIN1Q9UJX0 560 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 EDARQ9UNE0 448 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 ZNF232Q9UNY5 417 aa15.99■□□□□ 0.15
LINC00960-201ENST00000463183 A0A0G2JPF8 293 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 CDHR4A6H8M9 788 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 HNRNPCL2B2RXH8 293 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 HNRNPCL3B7ZW38 293 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 HNRNPCL1O60812 293 aaKnown RBP15.98■□□□□ 0.15
LINC00960-201ENST00000463183 HNRNPCL4P0DMR1 293 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 HTR3AP46098 478 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 ATP4BP51164 291 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 COPZ1P61923 177 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 FADDQ13158 208 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 AP1ARQ63HQ0 302 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 C10orf111Q8N326 155 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 RABEP2Q9H5N1 569 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 PLEKHF2Q9H8W4 249 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 MED4Q9NPJ6 270 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 VAPAQ9P0L0 249 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 PRSS50Q9UI38 385 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 DSPPQ9NZW4 1301 aa15.98■□□□□ 0.15
LINC00960-201ENST00000463183 MAP1AP78559 2803 aaPredicted RBP15.98■□□□□ 0.15
LINC00960-201ENST00000463183 FREM1Q5H8C1 2179 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 DEFB108AA8MXU0 73 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 CYTIPO60759 359 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 ADAP00813 363 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 PRG2P13727 222 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 HOXB9P17482 250 aaPredicted RBP15.97■□□□□ 0.15
LINC00960-201ENST00000463183 CRYGSP22914 178 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 IL32P24001 234 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 CXCR1P25024 350 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 SLC1A3P43003 542 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 HOXC5Q00444 222 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 LRIF1Q5T3J3 769 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 SERPINA11Q86U17 422 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 ZNF440Q8IYI8 595 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 ZNF100Q8IYN0 542 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 BBS10Q8TAM1 723 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 PMM1Q92871 262 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 DDIT4LQ96D03 193 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 UBTD1Q9HAC8 227 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 A4GALTQ9NPC4 353 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 ING1Q9UK53 422 aaPredicted RBP15.97■□□□□ 0.15
LINC00960-201ENST00000463183 TRIM33Q9UPN9 1127 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 HDGFL3Q9Y3E1 203 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 HIVEP1P15822 2718 aa15.97■□□□□ 0.15
LINC00960-201ENST00000463183 PRRC2AP48634 2157 aaKnown RBP15.97■□□□□ 0.15
LINC00960-201ENST00000463183 A0A1W2PP18 115 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 ZC3H12DA2A288 527 aaKnown RBP15.96■□□□□ 0.15
LINC00960-201ENST00000463183 EVPLLA8MZ36 301 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 ANGPT2O15123 496 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 GOSR1O95249 250 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 IGHV3-9P01782 118 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 RAF1P04049 648 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 THBDP07204 575 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 EDNRAP25101 427 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 AQP1P29972 269 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 BNIP2Q12982 314 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 TESK1Q15569 626 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 RNF220Q5VTB9 566 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 DHDDSQ86SQ9 333 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 MTDHQ86UE4 582 aaKnown RBP15.96■□□□□ 0.15
LINC00960-201ENST00000463183 CCDC103Q8IW40 242 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 NINJ1Q92982 152 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 S100PBPQ96BU1 408 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 HS3ST6Q96QI5 342 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 TACO1Q9BSH4 297 aaKnown RBP15.96■□□□□ 0.15
LINC00960-201ENST00000463183 TMEM120AQ9BXJ8 343 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 IKZF5Q9H5V7 419 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 ARMC7Q9H6L4 198 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 BCO1Q9HAY6 547 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 SLC52A3Q9NQ40 469 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 TMEM181Q9P2C4 612 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 LEF1Q9UJU2 399 aaPredicted RBP15.96■□□□□ 0.15
LINC00960-201ENST00000463183 IFT52Q9Y366 437 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 ROS1P08922 2347 aa15.96■□□□□ 0.15
LINC00960-201ENST00000463183 ZNF814B7Z6K7 855 aa15.95■□□□□ 0.14
LINC00960-201ENST00000463183 RAMP1O60894 148 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms