RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 EDNRAP25101 427 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 HTR3AP46098 478 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 CLK1P49759 484 aaKnown RBP16.79■□□□□ 0.28
VARS-220ENST00000461874 MVDP53602 400 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 PDK3Q15120 406 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 TAB1Q15750 504 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 MAPK11Q15759 364 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 ABLIM2Q6H8Q1 611 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 ALKBH2Q6NS38 261 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 PRSS57Q6UWY2 283 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 GALNT5Q7Z7M9 940 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 ARL5BQ96KC2 179 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 C18orf12Q96KH6 178 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 OR52B2Q96RD2 323 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 PRSS50Q9UI38 385 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 NAV3Q8IVL0 2385 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 HS3ST1O14792 307 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 UBDO15205 165 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 DBIP07108 87 aaKnown RBP16.78■□□□□ 0.28
VARS-220ENST00000461874 ZCCHC18P0CG32 403 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 IL7RP16871 459 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 GNA13Q14344 377 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 DNAJC14Q6Y2X3 702 aaPredicted RBP16.78■□□□□ 0.28
VARS-220ENST00000461874 BHLHA15Q7RTS1 189 aaPredicted RBP16.78■□□□□ 0.28
VARS-220ENST00000461874 BIVMQ86UB2 503 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 WDR60Q8WVS4 1066 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 ZHX1-C8orf76Q96EF9 292 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 PERPQ96FX8 193 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 OR11A1Q9GZK7 315 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 USF3Q68DE3 2245 aa16.78■□□□□ 0.28
VARS-220ENST00000461874 RAI1Q7Z5J4 1906 aaPredicted RBP16.78■□□□□ 0.28
VARS-220ENST00000461874 TMED7-TICAM2A0A0A6YYA0 188 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 FAAHO00519 579 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 DNPH1O43598 174 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 CNOT4O95628 575 aaKnown RBP16.77■□□□□ 0.28
VARS-220ENST00000461874 INHBBP09529 407 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 CCNA2P20248 432 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 NCMAPQ5T1S8 102 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 MRPL2Q5T653 305 aaKnown RBP16.77■□□□□ 0.28
VARS-220ENST00000461874 MSANTD1Q6ZTZ1 278 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.77■□□□□ 0.28
VARS-220ENST00000461874 PEX5LQ8IYB4 626 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 ZNF100Q8IYN0 542 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 ZNF611Q8N823 705 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 POM121Q96HA1 1249 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 ITCHQ96J02 903 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 POTEKPQ9BYX7 375 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 GSX2Q9BZM3 304 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 RMND5AQ9H871 391 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 NGBQ9NPG2 151 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 EMC3Q9P0I2 261 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 P2RX2Q9UBL9 471 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 OSGIN1Q9UJX0 560 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 TRAPPC4Q9Y296 219 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 TMED7Q9Y3B3 224 aa16.77■□□□□ 0.28
VARS-220ENST00000461874 CFAP73A6NFT4 308 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 ZNF716A6NP11 495 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 ZNF208O43345 1280 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 LYZL6O75951 148 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 ANP32DO95626 131 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 ETFAP13804 333 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 PAX1P15863 534 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 SLC1A3P43003 542 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 POLR2HP52434 150 aaKnown RBP16.76■□□□□ 0.27
VARS-220ENST00000461874 POLR2JP52435 117 aaKnown RBP16.76■□□□□ 0.27
VARS-220ENST00000461874 EPS8Q12929 822 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 CAPRIN1Q14444 709 aaKnown RBP16.76■□□□□ 0.27
VARS-220ENST00000461874 AGBL2Q5U5Z8 902 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 ADAM5Q6NVV9 412 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 EPGNQ6UW88 154 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 SEZ6L2Q6UXD5 910 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 YTHDF3Q7Z739 585 aaKnown RBP16.76■□□□□ 0.27
VARS-220ENST00000461874 MIER2Q8N344 545 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 OR9I1Q8NGQ6 314 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 PIGXQ8TBF5 258 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 AKAP1Q92667 903 aaKnown RBP eCLIP16.76■□□□□ 0.27
VARS-220ENST00000461874 DNAJA3Q96EY1 480 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 SMR3AQ99954 134 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 ESRP2Q9H6T0 727 aaKnown RBP16.76■□□□□ 0.27
VARS-220ENST00000461874 TPT1P8Q9HAU6 139 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 CALML5Q9NZT1 146 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 TMEM181Q9P2C4 612 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 RNF115Q9Y4L5 304 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 USH1CQ9Y6N9 552 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 CADP27708 2225 aa16.76■□□□□ 0.27
VARS-220ENST00000461874 DSPPQ9NZW4 1301 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 TMEM72A0PK05 275 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 TMCC2O75069 709 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 CD3EP07766 207 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 TFPTP0C1Z6 253 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 HOXB4P17483 251 aaPredicted RBP16.75■□□□□ 0.27
VARS-220ENST00000461874 COX5AP20674 150 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 IGHV1-2P23083 117 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 TACR3P29371 465 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 ADSLP30566 484 aaPredicted RBP16.75■□□□□ 0.27
VARS-220ENST00000461874 CRATP43155 626 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 PTH2RP49190 550 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 MAP2K6P52564 334 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 SLC16A1P53985 500 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 OR2B6P58173 313 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms