RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 OR9A1PQ8NGU1 263 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 MRAPQ8TCY5 172 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 BADQ92934 168 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 EFHD2Q96C19 240 aaPredicted RBP2.84□□□□□ -1.95
CLK1-206ENST00000461326 CELF6Q96J87 481 aaKnown RBP2.84□□□□□ -1.95
CLK1-206ENST00000461326 RPRD1AQ96P16 312 aaPredicted RBP2.84□□□□□ -1.95
CLK1-206ENST00000461326 SMIM14Q96QK8 99 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 PSKH2Q96QS6 385 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 CYP2S1Q96SQ9 504 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 EDEM2Q9BV94 578 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 PARD6BQ9BYG5 372 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 RHBGQ9H310 441 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 LRRN3Q9H3W5 708 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 IKZF5Q9H5V7 419 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 ISG20L2Q9H9L3 353 aaKnown RBP2.84□□□□□ -1.95
CLK1-206ENST00000461326 WARS2Q9UGM6 360 aaKnown RBP2.84□□□□□ -1.95
CLK1-206ENST00000461326 PLLPQ9Y342 182 aa2.84□□□□□ -1.95
CLK1-206ENST00000461326 SCAPERQ9BY12 1400 aa2.84□□□□□ -1.96
CLK1-206ENST00000461326 NCOA2Q15596 1464 aa2.84□□□□□ -1.96
CLK1-206ENST00000461326 LRRC9Q6ZRR7 1453 aa2.84□□□□□ -1.96
CLK1-206ENST00000461326 ABCC1P33527 1531 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SYCP2Q9BX26 1530 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 A0A1W2PQ72 361 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 FRG2CA6NGY1 282 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 RS1O15537 224 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 ZNF208O43345 1280 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 LGALS2P05162 132 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 FGF9P31371 208 aaPredicted RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 RPL13AP40429 203 aaKnown RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 EPS15P42566 896 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 CCT3P49368 545 aaKnown RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 LIM2P55344 173 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 ASPHQ12797 758 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 KIAA0040Q15053 153 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 LRRC36Q1X8D7 754 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SLC25A52Q3SY17 297 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 CFAP221Q4G0U5 840 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 TMEM52BQ4KMG9 183 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SFT2D3Q587I9 215 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 CCDC137Q6PK04 289 aaKnown RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 WDR74Q6RFH5 385 aaPredicted RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 FRA10AC1Q70Z53 315 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 GDPD3Q7L5L3 318 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 C17orf82Q86X59 251 aaPredicted RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 VSTM4Q8IW00 320 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SLC35F2Q8IXU6 374 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SLC38A6Q8IZM9 456 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 OR4D9Q8NGE8 314 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 OR13C2Q8NGS9 318 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 OR2A12Q8NGT7 310 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 MAIP1Q8WWC4 291 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 HTR3CQ8WXA8 447 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 FAM122AQ96E09 287 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SECISBP2Q96T21 854 aaKnown RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 SPATA16Q9BXB7 569 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SRXN1Q9BYN0 137 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 DEFB126Q9BYW3 111 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 RAB34Q9BZG1 259 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 GLIPR2Q9H4G4 154 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SLC7A10Q9NS82 523 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 ZNF275Q9NSD4 429 aaPredicted RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 PAK1IP1Q9NWT1 392 aaPredicted RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 VNN3Q9NY84 501 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 SIGLEC8Q9NYZ4 499 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 IL36GQ9NZH8 169 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 PHF11Q9UIL8 331 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 CDH9Q9ULB4 789 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 COPS3Q9UNS2 423 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 ZNF518AQ6AHZ1 1483 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 ZFYVE16Q7Z3T8 1539 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 GPATCH8Q9UKJ3 1502 aaKnown RBP2.83□□□□□ -1.96
CLK1-206ENST00000461326 HECW2Q9P2P5 1572 aa2.83□□□□□ -1.96
CLK1-206ENST00000461326 ABCA6Q8N139 1617 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 IGHV1OR15-1A0A075B7D0 117 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 FAM168BA1KXE4 195 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 LRP5LA4QPB2 252 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 ZNF705EA8MWA4 302 aaPredicted RBP2.82□□□□□ -1.96
CLK1-206ENST00000461326 TRDCB7Z8K6 153 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 PRRG1O14668 218 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 POLR2DO15514 142 aaKnown RBP2.82□□□□□ -1.96
CLK1-206ENST00000461326 OR10H3O60404 316 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 SRSF10O75494 262 aaKnown RBP2.82□□□□□ -1.96
CLK1-206ENST00000461326 GNA14O95837 355 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 SEMG1P04279 462 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 IGLL1P15814 213 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 COX5AP20674 150 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 EPHX2P34913 555 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 MAP3K8P41279 467 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 DAP3P51398 398 aaKnown RBP2.82□□□□□ -1.96
CLK1-206ENST00000461326 CRYBB1P53674 252 aaPredicted RBP2.82□□□□□ -1.96
CLK1-206ENST00000461326 AIF1P55008 147 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 RIPPLY3P57055 190 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 UBE2HP62256 183 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 RPL23AP62750 156 aaKnown RBP2.82□□□□□ -1.96
CLK1-206ENST00000461326 TNFRSF17Q02223 184 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 LRRC74AQ0VAA2 488 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 ELAVL3Q14576 367 aaKnown RBP2.82□□□□□ -1.96
CLK1-206ENST00000461326 ARL6IP1Q15041 203 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 AANATQ16613 207 aa2.82□□□□□ -1.96
CLK1-206ENST00000461326 TRIM16LQ309B1 348 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms