RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PGRP06401 933 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 HTR3AP46098 478 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 PDLIM4P50479 330 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 FABP6P51161 128 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 CCR4P51679 360 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 MERTKQ12866 999 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 SWI5Q1ZZU3 235 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 ARHGAP11BQ3KRB8 267 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 UGT3A2Q3SY77 523 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 ZNF540Q8NDQ6 660 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 TMEM45BQ96B21 275 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 CHMP6Q96FZ7 201 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 MANSC1Q9H8J5 431 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 PARPBPQ9NWS1 579 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 BAIAP2L1Q9UHR4 511 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 PCDHGB4Q9UN71 923 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 NPIPA5A0A0B4J1W7 369 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 LOC390937A0A1W2PQ73 354 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 NPIPA7E9PJI5 369 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 FAAHO00519 579 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 ZNF208O43345 1280 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 TRIM13O60858 407 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 MRPL33O75394 65 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 UGT2B17O75795 530 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 NPIPA8P0DM63 369 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 LAMP1P11279 417 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 PGM1P36871 562 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 NR4A2P43354 598 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 PTGR1Q14914 329 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 SMU1Q2TAY7 513 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 NDUFAF6Q330K2 333 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 SPDYE7PQ495Y7 208 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 ATP6AP1LQ52LC2 224 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 CMIPQ8IY22 773 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 IFT20Q8IY31 132 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 RFLNBQ8N5W9 214 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 ZNF614Q8N883 585 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 OR7A2PQ8NGA2 310 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 OR52N5Q8NH56 324 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 SAP130Q9H0E3 1048 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 EML4Q9HC35 981 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 SLC17A5Q9NRA2 495 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 KCNE5Q9UJ90 142 aa12.75□□□□□ -0.37
DNMT3A-207ENST00000461228 RNASET2O00584 256 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 COPEO14579 308 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 PIP5K1BO14986 540 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 C6orf47O95873 294 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 WNT11O96014 354 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 LINC00032P0C843 101 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 MAGEA8P43361 318 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 PPOXP50336 477 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 ZNF83P51522 516 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 SNRPD2P62316 118 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 HBA1P69905 142 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 TXNL4AP83876 142 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 MAD2L1Q13257 205 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 EFNB3Q15768 340 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 FAM153CQ494X1 144 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 GALNTL6Q49A17 601 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 EMBQ6PCB8 327 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 ABHD12BQ7Z5M8 362 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 MEX3DQ86XN8 651 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 UBE2J2Q8N2K1 259 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 FAM169BQ8N8A8 192 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 OR2W6PQ8NHA6 318 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 THUMPD3Q9BV44 507 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 KATNB1Q9BVA0 655 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 GATA5Q9BWX5 397 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 QRSL1Q9H0R6 528 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 SERHL2Q9H4I8 314 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 EXD2Q9NVH0 621 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 TBK1Q9UHD2 729 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
DNMT3A-207ENST00000461228 A0A1W2PPM1 405 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 HAX1O00165 279 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 UBTFL6P0CB48 400 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 ZNF23P17027 643 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 GIFP27352 417 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 MPGP29372 298 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 POU3F1Q03052 451 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 LIPNQ5VXI9 398 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 UGT2A3Q6UWM9 527 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 C10orf107Q8IVU9 208 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 DDIASQ8IXT1 998 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 WDR31Q8NA23 367 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 ATP6V1C2Q8NEY4 427 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 OR8J2Q8NGG1 315 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 OR5D16Q8NGK9 328 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 ZFAND2BQ8WV99 257 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 HPS1Q92902 700 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 MSI2Q96DH6 328 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 DUSP26Q9BV47 211 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 SF3B5Q9BWJ5 86 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 TMEM181Q9P2C4 612 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms